Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00852 ATGGATGCCACTCTAAGACAAAGAGAAGAGAGGCACCCGCACCACAGCTCGACGGCAAGTCTCGCAACGATACTTTCGATCTTGACTTTGAAGAATGACTTCAAGCAGTTAGAAGCCACAACAGATTGTTCTATTTTATATTCACCAGATTTTGCGGACATGTCTTTGACTTCTTCTATGGCAATCAAAATCTATTGCTCAATGATATCAAAGAAATTGAATACTGCTGAGTACTTCTGTGACAGATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCCAGTTTCGGATTGGCGAATCTTTTCTCCAGGCCCGGTGGAGGGTTCATATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGCTACTTGTGGCATGACCTTTGGAATTGTTCCTTTTGTCTCAAGACGAGTGTTCTTTTAG 426 0.4319 MDATLRQREERHPHHSSTASLATILSILTLKNDFKQLEATTDCSILYSPDFADMSLTSSMAIKIYCSMISKKLNTAEYFCDRFNLKLHTAGIIAASFGLANLFSRPGGGFISDAVSKRFGMRATCGMTFGIVPFVSRRVFF 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00852 141 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 75 123 IPR044772 GO:0015112
Aip08g00852 141 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 75 123 - -
Aip08g00852 141 SUPERFAMILY MFS general substrate transporter 72 131 IPR036259 -
Aip08g00852 141 Gene3D MFS general substrate transporter like domains 42 138 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00852 Aip-Chr8 9125115 9126665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00852 65 138 Inorganic Solute Cotransporters AT1G12940 43.590 2.59e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00852 K02575 - aip:107616635 219.164