Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00847 ATGATCATGTCTTCGAAGCATGAGCAAGTGAAGATCATAGAAGAATGTAAAGTTGCACCACCAGAAGGGTCTCTTGCCTCCACCACCACCATTGTTCCCCTCACTTACTTGGATATCCCATGGTTCCTATGCCATCCGGTTAAGCGCATCTTCTTCTATGACTTCCCTAACTCCACCAACCACTTCCTTCAATCATCACTCCCTCCTCTCAAACACTCCCTCTCCCTTTCCCTCCAACACTTCTTTCCATTCGCCTCCAACCTCATCGTACCTCCCTCCCCAAGTGTCCCCTTCATCCGTTTTCTTGACGGTCTTGACTCACTCTCTCTCACCATTGCAGAGTCTAAAGCAGACTTTTCCTTACTTGTATCTGATTCGCCACAAGATGTTCGCTTTCTACACCCTTTGATCGCTTCTTTGCCTCCTAAGGTTACCATGGAGGATGGCACGCTTGTTATGCCTCTCATGGCCATTCAAGTCACTGTTCTTCCAAACACTGGCTTCGCCATTTCTCTAACATTCAGCCATCTCGCCGCCGATGGCTACTCGCTTCATCATTTCATCAAGTTTTGGGCCAATCTTTGCAAGCAAATAATAACAAGAGGTA 607 0.4728 MIMSSKHEQVKIIEECKVAPPEGSLASTTTIVPLTYLDIPWFLCHPVKRIFFYDFPNSTNHFLQSSLPPLKHSLSLSLQHFFPFASNLIVPPSPSVPFIRFLDGLDSLSLTIAESKADFSLLVSDSPQDVRFLHPLIASLPPKVTMEDGTLVMPLMAIQVTVLPNTGFAISLTFSHLAADGYSLHHFIKFWANLCKQIITRG 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00847 202 Gene3D - 5 201 IPR023213 -
Aip08g00847 202 PANTHER COUMAROYL-COA:ANTHOCYANIDIN 3-O-GLUCOSIDE-6''-O-COUMAROYLTRANSFERASE 1-RELATED 10 197 - -
Aip08g00847 202 Pfam Transferase family 26 196 - -
Aip08g00847 202 PANTHER - 10 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00847 Aip-Chr8 9072243 9072849 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00847 50 198 Monolignol Biosynthesis Gene Families AT5G48930 27.273 8.61e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00847 - - adu:107462106 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00847 08 9072243 9072849 Aip08g00847 08 9072243 9072849 ECH