Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00834 ATGGAGTTTGAGCTTGAGAACCCCTTTGATGAGAACTACCATAACCTTCCCTTTGAAGCTGTCTCCTCCCTCTTCCACATTGAATCTGAACACATCCCTCCCTCCAATTACTTCCACACTCTCAAGGCCACTGATTTTGATATCTCTCTTAGAACACATCTCATTTCCTTCATATCACAGTTGTCCTGCACCTTTGATCCGGTTCTGCCTTACCTTGCTACCAACTATCTAGATCGCTATCTCGCCAACCAACCCATATTGcaaccaaagccatggaccaacaagcttcttgcaatctctTGCTTCTCTCTAGCTGCTAAGATGCTAAAGATAGAGTATTCTCCCACTGATGTTCAGGTTCTTGTGAACAATCATGGTGATGGTGGTGTCATATTTGAGGCACAAACAATACAAAGAATGGAGGCCATTGTGTTGGGGACACTACAATGGCGCATGCGTTCCATAACACCATTCTCATTCATCCCTTTCTTCATCAACTTGTTGGGCATCAATGACCCTTCATTCAACCAGGTACTCAAAGATAGGGCCTCCCAGATCATATTGAAGTCACAAACAGAGATAAAGGTTTTAGAATTCAAGCCATCTGTAATTGCAGCATCAGCTCTACTGTCTGCTTCACATGAGTTGTTTCCCTTTCAGTATCCATGCTTCTTTAGAGCAATATCTGATTCTTCATATGTAAATAAAGTACATTCTCTACTACTTAATGCTCCTTTTACTTTTAGTTTCTCTATGTTCTTTTTTATATTATTATTAATGGAATCACCCGGGGTTAATATCAGTGGAGTAAAAAGAATGTTTCTTTGCTTTCTTTTATAA 840 0.381 MEFELENPFDENYHNLPFEAVSSLFHIESEHIPPSNYFHTLKATDFDISLRTHLISFISQLSCTFDPVLPYLATNYLDRYLANQPILQPKPWTNKLLAISCFSLAAKMLKIEYSPTDVQVLVNNHGDGGVIFEAQTIQRMEAIVLGTLQWRMRSITPFSFIPFFINLLGINDPSFNQVLKDRASQIILKSQTEIKVLEFKPSVIAASALLSASHELFPFQYPCFFRAISDSSYVNKVHSLLLNAPFTFSFSMFFFILLLMESPGVNISGVKRMFLCFLL 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00834 279 CDD CYCLIN 50 145 IPR013763 -
Aip08g00834 279 Pfam Cyclin, N-terminal domain 22 152 IPR006671 -
Aip08g00834 279 Gene3D - 34 153 - -
Aip08g00834 279 SMART cyclin_7 52 146 IPR013763 -
Aip08g00834 279 Pfam Cyclin, C-terminal domain 155 223 IPR004367 -
Aip08g00834 279 PANTHER CYCLINS 11 234 IPR039361 -
Aip08g00834 279 Gene3D - 23 216 - -
Aip08g00834 279 SUPERFAMILY Cyclin-like 19 152 IPR036915 -
Aip08g00834 279 SUPERFAMILY Cyclin-like 137 213 IPR036915 -
Aip08g00834 279 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 11 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00834 Aip-Chr8 8931332 8933821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00834 1 236 Core Cell Cycle Gene Families AT4G03270 45.817 1.70e-62 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00834 K18812 - gmx:100799951 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00834 08 8931332 8933821 Aip08g00834 08 8931332 8933821 ECH
Aip08g00834 08 8931332 8933821 Aip03g01659 03 19817331 19819335 PCT