Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00827 ATGATGAACCCATGCTTCTGCTCCTTCTTCTTCTTCTACTACTACTTCTTCTCATTGACTCCTTCCCTTGCCCTTGCACCTCTCACCGCCATCTCCGCAACTCAATCTCTCTCCGGTGACCAGACCCTTCTCTCCAAAGGTGGAATCTTCGAACTCGGTTTCTTCAAGCCAGGTAACTCCTCTAACTACTACATAGGCATGTGGTACAAGAAGCTCTCTCTACAAACAATTGTTTGGGTTGCCAATAGAGACCACCCTGTATCTGATAAGAGCACTGCCAACTTCACTATTTCAAAGGGTAACTTAGTACTCTTTGATGAGTCTCAAACTCAAGTTTGGTCAACCAACATAACTACCTCTCCTGCTTCACCTTCTGCACTAGTAGTATCTATTCTTCTCGATAATGGGAACCTCATAATTAGTAATAACCCTAATGCATCATCATCAGAAGAAGCCATTTGGCAGAGTTTTGATCACCCAACAGATACATGGCTTCCCGGAGGGAAAATCAAACTTGATAACAAAACAAAGAAGCCTCAGTATCTAACTTCATGGAAGAACAATGAAGATCCTGCAACTGGTCTCTTCTCTTTGGAATTGGACCCTAAAGGGAGCACTTCATACCTTATTCTTTGGAACAAGACTGAACAGTATTGGACGAGTGGCCCTTGGAATGGTCATATCTTCAGCTTGGTCCCTGAGATGAGGTTGAATTACATCTACAATTTCAGCTTCATTTCGAACGAAAACGAGAGCTATTTCACCTATACAGTCTATAATTCTTCCATTATATCGCGGTTCGTGATGGATGTTTCGGGCCAGATCAAGCAACTGTCATGGCTGGATAGCATTCAGCAATGGAATTTGTTTTGGTCTCAGCCGAGAACGCAGTGTGAGGTTTATGCTTTCTGTGGTGCCTTCGGGAGCTGCACCGAGAACTCAATGCCATACTGCAATTGCTTGCAAGGTTTTGAGCCAAAATCAAAGTCTGATTGGGATCTTCAGGATCAATCAGGAGGGTGTGTCAGGAAAACAAGTTTGCAATGTGAGAGTTCAAAATCATCTAATGGTGAAAAGGACAGGTTTCTACCAATCCTAAACATGGCATTACCGAAACATTCAGAAGAAGTAGGGGCAGGAACTAAAGAGGAATGTGAATCAACATGCTTGAACAATTGTTCCTGCACTGCTTATGCATATGGAAGTAGCCAATGTTCAATTTGGAATGGAGATCTCTTGAATCTGCAGCAGCTATCTTCAGATGATAGCAGTGGACAAATCTTGTACCTCAAGCTTGCAGCTTCTGAGTTTCATGATGCTAAGAGCAACAAGGTGCCAGTTATTGGTGGCATTGTGGGAGGTGTTGTTGCCATAGGGATTCTCCTCGGCCTTGTTCTGTTCTTGGTGATTCGGCGAAGGAAGAGAACGGTTGGGAAGGGAAAGCTAGTGGAGGGTTCACTGGTGGCATTTGGGTACAGAGACCTACAAAACGCAACCAAGAATTTCTCAGAGAAATTGGGAGGAGGGGGTTTCGGTTCTGTGTTCAAAGGCTATTTGGGTGATTCAAGTGTTGTGGCAGTGAAGAAGCTTGAGAGCATTAGCCAAGGAGAGAAGCAGTTTAGAACAGAAGTTAGTACTATTGGGACAGTTCAACATGTTAATCTTGTTCGGTTAAGAGGTTTCTGCTCCGAAGGCTCCAAAAAGTTATTGGTTTATGATTACATGCCAAATGGCTCCTTAGAATTCCATCTCTTTCAGAATAACTCCTCCAAGATCATGGACTGGAAAATGAGGTACCAAATCGCGCTCGGCACGGCCAGGGGATTGACTTATCTTCATGATAGTTGTAGAGACTGCATCATACACTGTGATGTCAAGCCTGAGAACATCCTTCTAGATGCTCAATTTTGTCCCAAAGTCGCAGATTTCGGCCTTGCAAAGCTTGTTGGAAGAGAATTCAGCAGGGTCCTTACAACAATGAGAGGAACAAGAGGCTACCTTGCCCCTGAATGGATCTCTGGGGTGGCCATAACCCCCAAAGCAGATGTCTACAGCTACGGAATGATGCTTTTCGAGTTTGTATCCGGCAAGAGGAACTCTGAGCCTTGTGATGATGGCAGAGTGAAGTTCTTCCCTACATGGGCTGCTACTCTTGTAACTGAAGGCAGCAATGTCCTTAGCCTCTTGGACCCTAGGTTGGAGGCGAATGCGGATGTTGAAGAGGTCACTAGAATAATCAAAGTAGCTTCTTGGTGTGTCCAAGATGATGAATCTCATAGGCCAACCATGGCTCAGGTTGTTCAGATACTTGAAGGGATCTTGGATGTCGCTTCGCCTCCCATTCCAAGAACCCTTCAAGTGTTTCTGGACAACCAGGAGGACATAGTTTTCTTCACCGATTCCAACTCTTCCAACCAGAGCTCACAGGTGAAGAGCACCACCACTGTCTCAACAACATCATCTCAACCTAAAAGTAACATCTCTTCAGCAAGCTCCAAGTCCTTAGGAGGAAATTAA 2517 0.4462 MMNPCFCSFFFFYYYFFSLTPSLALAPLTAISATQSLSGDQTLLSKGGIFELGFFKPGNSSNYYIGMWYKKLSLQTIVWVANRDHPVSDKSTANFTISKGNLVLFDESQTQVWSTNITTSPASPSALVVSILLDNGNLIISNNPNASSSEEAIWQSFDHPTDTWLPGGKIKLDNKTKKPQYLTSWKNNEDPATGLFSLELDPKGSTSYLILWNKTEQYWTSGPWNGHIFSLVPEMRLNYIYNFSFISNENESYFTYTVYNSSIISRFVMDVSGQIKQLSWLDSIQQWNLFWSQPRTQCEVYAFCGAFGSCTENSMPYCNCLQGFEPKSKSDWDLQDQSGGCVRKTSLQCESSKSSNGEKDRFLPILNMALPKHSEEVGAGTKEECESTCLNNCSCTAYAYGSSQCSIWNGDLLNLQQLSSDDSSGQILYLKLAASEFHDAKSNKVPVIGGIVGGVVAIGILLGLVLFLVIRRRKRTVGKGKLVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGYLGDSSVVAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGSKKLLVYDYMPNGSLEFHLFQNNSSKIMDWKMRYQIALGTARGLTYLHDSCRDCIIHCDVKPENILLDAQFCPKVADFGLAKLVGREFSRVLTTMRGTRGYLAPEWISGVAITPKADVYSYGMMLFEFVSGKRNSEPCDDGRVKFFPTWAATLVTEGSNVLSLLDPRLEANADVEEVTRIIKVASWCVQDDESHRPTMAQVVQILEGILDVASPPIPRTLQVFLDNQEDIVFFTDSNSSNQSSQVKSTTTVSTTSSQPKSNISSASSKSLGGN 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00827 838 Gene3D - 28 158 IPR036426 -
Aip08g00827 838 PIRSF SRK 1 823 IPR024171 GO:0004674
Aip08g00827 838 SMART blect_4 34 160 IPR001480 -
Aip08g00827 838 Pfam D-mannose binding lectin 76 186 IPR001480 -
Aip08g00827 838 ProSiteProfiles Bulb-type lectin domain profile. 28 153 IPR001480 -
Aip08g00827 838 SMART ntp_6 357 432 IPR003609 -
Aip08g00827 838 Pfam PAN-like domain 357 414 IPR003609 -
Aip08g00827 838 Gene3D Phosphorylase Kinase; domain 1 466 574 - -
Aip08g00827 838 ProSiteProfiles PAN/Apple domain profile. 349 433 IPR003609 -
Aip08g00827 838 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 225 IPR036426 -
Aip08g00827 838 SMART serkin_6 500 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00827 838 Gene3D Transferase(Phosphotransferase) domain 1 575 779 - -
Aip08g00827 838 SUPERFAMILY Protein kinase-like (PK-like) 488 804 IPR011009 -
Aip08g00827 838 MobiDBLite consensus disorder prediction 800 838 - -
Aip08g00827 838 CDD PAN_AP_plant 345 433 - -
Aip08g00827 838 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 12 801 - -
Aip08g00827 838 Pfam Protein kinase domain 503 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00827 838 Pfam S-locus glycoprotein domain 219 328 IPR000858 GO:0048544
Aip08g00827 838 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 12 801 - -
Aip08g00827 838 CDD STKc_IRAK 506 773 - -
Aip08g00827 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Aip08g00827 838 ProSiteProfiles Protein kinase domain profile. 500 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00827 838 CDD B_lectin 34 160 IPR001480 -
Aip08g00827 838 ProSitePatterns Protein kinases ATP-binding region signature. 506 529 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00827 Aip-Chr8 8776006 8779325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00827 456 780 Receptor kinase-like Gene Family AT5G20050 41.111 6.55e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip08g00827 Pkinase 6.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00827 - - gmx:100782119 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00827 08 8776006 8779325 Aip08g00827 08 8776006 8779325 ECH