Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00817 ATGAGAACAATCACTCTTCTTCTTCTTCTACTCTTCCTCCTCTATGATTTTTTGCAGGCGCATTCTGCACAAGATACTCTAATCACCGGCCAAAGCATACCTAGAACTACAAAAGTTCTTGCTTCAGCTGGTGAAAAATTCGTACTAGGCTTCTTCTCTCCTCTGGAAAACCCAAGTCAAAGTTACCTCGGAATATGGTACAACACCAACAGAACTTACCCAGGAAAAACAGTAATGGTTTGGGTTGCAAATAGAGACAATCCTGTTCTGGGTTCCAATGGTGGAGGAGTCTTCCAAATTGCACAAGATGGAAATCTTCTAGTCACAAATGAATCAGGGTCAACGTTCTGGTCTTCTAAACTTGATAAATCCAGTTCCAATAACAGAACAGTCAAGTTAACCGACTCTGGGAACTTAGTGTTGTTCCAGCATGATGATGATGGCAATGGAACAAGCTACATAATTTGGCAAAGCTTTCAAGACCCAACAGACACGTTTCTTCCCGGAATGGAAATAGACAGATCCATGGAACTTACTTCTTGGAGATACGACGGCATTGGCGGTGGAAGAGAGAGCTTCTTCACCTTCAAGATGTCTCAAACAGGAAACAACCGTTTCAGAATCATGGATGGCCAAAACCAACTTCACTGGGAGAATGATGGACTCAATTCCGATGATTTGTCCCCTGATGTGCTTGACTACTTGACAAACTTCACCGGTGCAGAAAATCGTCGATCCAAGTATGTCAACACAAACACTTCGAAATCGTTGTACTATTTATACCAAGACACAAGGATCGTGATGAACTCTACAGGAGAGTTACAATTTTGGAAGTGGGAAAAATCTGAATGGATCATGCAATGGAAGCAGCCTTCAAGCATATGCAAGATACACAATTTCTGTGGTACCTTTAGCAGCTGCAACGTCCATGATTGGATGCCATGCAAGTGTTTGCCAGGGTTTAGGCTCGCTTCAGAGTATGAAACTCAGAGCTATGAAATGGGGATGAAATTCCCAGGATGTGTGAGAAAGTCAGAATCCCATGGCGACAATAGAGACATGGTGTTCCTCAATTTACCTAACATAAGACTCGATGAGTTAGATCAAAAGGAATATAACACAGAGACTGAAGCAGAATGCAAGTTTTTGTGCTTTAACATGTCTCATCCACAGTGCCAGGCTTATGCATACAACACTTCTAACAACTATCGTGTCGTTACTTCTTCTTCGTGTCAGATTTGGACAAATGATTTAACTACTCTTCAAGTAGACCAAGTCGCTGGTGGTGATCTTGCTGTTCTTGTCAAGAGTTCAGATATAGGGCGAACAGTGGCATGTAATCCTTGCGGAATATATACAATTCCTTATCCGCTAAGTACAGGGCCAAACTGTGGAGACCCGGAATACTATAAGTTCAATTGCAGCTACTCAACAGGGCAGGTAAGTTTCATGATGCCCGGAGGACAATTGAAAAGAGTTACTTGGATCGACGAAAATGCCAGAAAGTTTTACATCGAAACGGATGATACATATCATTGTGATTACATCTATCAAAATGAAAAACCTGATCCTCCATTTGATGTGACTAACTGGTGCTTTAAAGAGGATCAAATAGAGATCAGTTGGCAACCGCCACTCGAACGACCTTGTAACGAGCCTAATGACTGCAGGGGTTTTCCCCATTCAAGATGCATGCCAACAATTGAAGGGAAAAACAAGTGCCTTTGTGATCCAAAATATCAATGGAATTCCTCAATTTCAAATTGTATGCAAGATGAGAAATCAAAAAATCATTTGAGGGACCGAGTACATTTGATTCTCATAGTAACTCTTGCTGGTGTGATTTTTCTAGCAAGCACAATGGTATTTGCTTATGTGAGGAGAAAAAAAGTGATAGACAGGGAAAACATTCAAATTCAGGAGAGCTTGTATGACACTGAAAGGCATGTTAAAGCTTTAATTGGTTTGGGACGTTTAGAAGAAAAAGACAGTAAAGGGATTGAAGTGCCATTTTACACTTTTGGAAGCATTGTAGCAGCTACTGATAATTTCTCAGATTCAAACAAGCTTGGACAAGGAGGTTATGGACCAGTTTACAAGGCAAGGTTTCCTGGAGGTCAAGACATTGCAGTAAAAAGGCTTTCAAGTGTTTCTACTCAAGGGTTAGAGGAGTTCAAGAATGAGACTGTTTTAATTGCCAAACTCCAACATCGGAACCTTGTTAGACTCAGAGGCTACTGTGTAAAAGGGGATGAAAAAATCTTACTCTATGAATATATGCCAAACAAAAGTTTGGACTCATTTATATTTGATCGGACACGAACTCTGCTCCTGAACTGGCAAATGCGATTTGACATAATTTTGGGCATTGCACGAGGATTGCTATATCTTCACCAAGACTCTATACTAAGAGTAATTCATAGAGATCTAAAAACTAGCAACATTCTTTTAGACATGGATATGACACCAAAGATTTCAGATTTTGGACTTGCAAAAATATTTGGAGGAAAAGAAACTGAAGCAAGCACAGAGAGAGTCATGGGAACATATGGATATATGGCACCAGAGTATGCTTTGGATGGATTTTTCTCAATCAAATCTGATGTTTTCAGTTTTGGTGTAGTCATATTAGAGATTCTAAGTGGAAAAAAGAACACAGGATTCTATCAATTCAAACAAACTGTTACCCTTTTGGGATATGCATGGGGATTATGGACAGAGAATAGGCTTACGGATTTAATGGATGCATCTTTCAGTGGAAATTGCAACGAGAATCAATTTATCAAGTGTTCACAAATTGCACTCTTGTGTGTGCAAGATGAACCAGGTGATCGACCAACCATGTCAAATGTTGTGACAATGCTTGATAGCGAGATTGCAACCATCCCTATTCCTACACAACCAACATTTTATGCAGTTAGAAGGACTAGGAGCACTACTGCTTCTTCTTCAAGCAAACCAGAGACAACTATGCCAGTTGAGAGCAGTTATCAAGAAGGAAGATAG 3006 0.4025 MRTITLLLLLLFLLYDFLQAHSAQDTLITGQSIPRTTKVLASAGEKFVLGFFSPLENPSQSYLGIWYNTNRTYPGKTVMVWVANRDNPVLGSNGGGVFQIAQDGNLLVTNESGSTFWSSKLDKSSSNNRTVKLTDSGNLVLFQHDDDGNGTSYIIWQSFQDPTDTFLPGMEIDRSMELTSWRYDGIGGGRESFFTFKMSQTGNNRFRIMDGQNQLHWENDGLNSDDLSPDVLDYLTNFTGAENRRSKYVNTNTSKSLYYLYQDTRIVMNSTGELQFWKWEKSEWIMQWKQPSSICKIHNFCGTFSSCNVHDWMPCKCLPGFRLASEYETQSYEMGMKFPGCVRKSESHGDNRDMVFLNLPNIRLDELDQKEYNTETEAECKFLCFNMSHPQCQAYAYNTSNNYRVVTSSSCQIWTNDLTTLQVDQVAGGDLAVLVKSSDIGRTVACNPCGIYTIPYPLSTGPNCGDPEYYKFNCSYSTGQVSFMMPGGQLKRVTWIDENARKFYIETDDTYHCDYIYQNEKPDPPFDVTNWCFKEDQIEISWQPPLERPCNEPNDCRGFPHSRCMPTIEGKNKCLCDPKYQWNSSISNCMQDEKSKNHLRDRVHLILIVTLAGVIFLASTMVFAYVRRKKVIDRENIQIQESLYDTERHVKALIGLGRLEEKDSKGIEVPFYTFGSIVAATDNFSDSNKLGQGGYGPVYKARFPGGQDIAVKRLSSVSTQGLEEFKNETVLIAKLQHRNLVRLRGYCVKGDEKILLYEYMPNKSLDSFIFDRTRTLLLNWQMRFDIILGIARGLLYLHQDSILRVIHRDLKTSNILLDMDMTPKISDFGLAKIFGGKETEASTERVMGTYGYMAPEYALDGFFSIKSDVFSFGVVILEILSGKKNTGFYQFKQTVTLLGYAWGLWTENRLTDLMDASFSGNCNENQFIKCSQIALLCVQDEPGDRPTMSNVVTMLDSEIATIPIPTQPTFYAVRRTRSTTASSSSKPETTMPVESSYQEGR 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00817 1001 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 178 IPR036426 -
Aip08g00817 1001 ProSiteProfiles Bulb-type lectin domain profile. 24 154 IPR001480 -
Aip08g00817 1001 Pfam S-locus glycoprotein domain 246 323 IPR000858 GO:0048544
Aip08g00817 1001 Pfam PAN domain 358 421 IPR003609 -
Aip08g00817 1001 Gene3D Phosphorylase Kinase; domain 1 657 759 - -
Aip08g00817 1001 Pfam Protein tyrosine and serine/threonine kinase 687 955 IPR001245 GO:0004672|GO:0006468
Aip08g00817 1001 ProSiteProfiles Protein kinase domain profile. 684 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00817 1001 CDD B_lectin 40 162 IPR001480 -
Aip08g00817 1001 SMART blect_4 31 162 IPR001480 -
Aip08g00817 1001 Gene3D Transferase(Phosphotransferase) domain 1 760 962 - -
Aip08g00817 1001 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 999 - -
Aip08g00817 1001 SMART ntp_6 351 435 IPR003609 -
Aip08g00817 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Aip08g00817 1001 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 999 - -
Aip08g00817 1001 CDD STKc_IRAK 690 956 - -
Aip08g00817 1001 ProSiteProfiles PAN/Apple domain profile. 341 438 IPR003609 -
Aip08g00817 1001 SUPERFAMILY Protein kinase-like (PK-like) 668 993 IPR011009 -
Aip08g00817 1001 Gene3D - 18 160 IPR036426 -
Aip08g00817 1001 SMART serkin_6 684 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00817 1001 MobiDBLite consensus disorder prediction 975 1001 - -
Aip08g00817 1001 Pfam D-mannose binding lectin 79 176 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00817 Aip-Chr8 8475921 8479619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00817 660 970 Receptor kinase-like Gene Family AT4G05200 55.096 2.19e-117 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g00817 PK_Tyr_Ser-Thr 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00817 - - aip:107612581 2033.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00817 08 8475921 8479619 Aip08g00817 08 8475921 8479619 ECH
Aip03g01630 03 19111984 19116567 Aip08g00817 08 8475921 8479619 PCT