Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00814 ATGAACATGGACTTGGATTTGAAGCTAACTTCTTGGAGGAGTGACAATGATCCTCAAAGTGGAAGCTACGCCTTCATGATGGCTTCAGATGGAGACAACCCTTATGTGATTTGGAAGAACAACCAGCTTTACTGGGAAAGAGGAATAAAGAATCCGAGTCCAGGGTCTATGTTTGGAACCGTAGTTTTCTTGTTGAACAAAACAAGCACAGACGAAGACCCTTCTTCTGCAACAAACACTCCCCCCTACAAAAACATTGGTAACAGATTTGGCAAAAAACAATCGCCGATTACGCGTGTTCCCGTTGATGAATTTAACAAGACGAGGCTAGTGATGAAGTGCAATGGGGAGCTTCAGTTTCTAACATGGGATGGTATCCAACAAGATTGGATCGTTCGTTGGAAGGCCCCAGATAGCTCCTGCGACAAGTATAATTTCTGTGGCAACTTCGCAAGCTGTGATTATAATCTGATTAATCTCAACATCAAGGAGTGCAAGTGTTTACCGGGATTCAGCAGTGTTATTGGTGGAGTCAGGGGATGTACAAGAAATTCATGGTCATGCAGTGGAGACACTACAGCGTTCTTGAATTTAGTGAAGGTGAAAGCAAGAGAACCACCTGATGAACAACACCCTGCAGCTAGTGAAACAGAATGCAAACAAATTTGTCTTAACAAGTGTCCTGAGTGCCAGGCCTATTCGTATGATGCAAAGGCTGCAACTTCTGAAAGTGGTGATGATAATGATAGTGCCCAGAAAAGTTGTCGGATCTGGACAGAGGAATTAGTTACACTTCAAGAAGGCTTCCATGGTGATGATACTGATAATAATGAAGATAATGATGCTCATAGTTTCTATGTTCGAGTAGACATATCAGACATAGAACCAACTCCAAGAACTTGTGAACCATGTGGGACAAACATGGTGCCTTATCCATTGAGCACTAGTTCGAACTGTGGTGACCCTATGTACTTCAACTTCAGCTGTAACCCCTCAACAGGCCAGCTTAGCTTCATTTCTAGAACTTCCAATTCCAATGCAACTTATCAGAAAGTTGCTATAGTGTATTCAGAATCCAGAAAGTTTGTCATGCAGGTTCATCCATCAAATACTCACTGCGAAGATGAGAGACCTGAAAGTGATGAAACTATGCAGATACACTCTCCGTTTTCTGTTGCGTATGATTGTTTTGATAAAGCCAAAGTAGAGGTTACTTGGGAACCACCACATGAACCTGTTTGTTCTGAGCCTAAAGACTGCGTAGGTTGGAACCATTCAAGTTGTAAAGTAGCCAGTGGTGGAAAGAGGTGTCTTTGTGATAAAAATTATCATTGGGATGGGATTGCTCTAGCGTGTACTATAGCAGATGAAGGAAAATCCAAAAGTCAAATTTCTTTGATTCTTGGGATAACTCTTGGAAGTTTGATTATTCTGGCATGTGCAATAACTTTTGCTTATCTATGGAGAAGGAAAATAACTCCAAAGATAGGCAAGGAAAGCAATGTGAAACAACGAAAACGCTTCATTGATAGTATAAGACATGTGAAAGATTTGATTGAGGATGGGGGATTAGAAGAACAGGACAATGAAGGCATAGAGGTACCTTATTTTGATTTTGAGAGCATAGTAGTAGCTACAGATAACTTCTCTGATGCAAATAAACTTGGACGCGGTGGTTATGGACCGGTTTACAAGGGTAAGCTTCAAAGTGGTGAAATTGTTGCAGTAAAGAGGCTTTCTAATGTCTCATCACAAGGCTTGCAGGAATTTAAGAATGAGGTTGTTTTGATAGCCAAACTTCAACATCGAAATCTTGTTAGATTAAGGGGCTACTGCATCAAAGGAGATGAAAAGATTCTACTATATGAATACATGCCTAACAAGAGCTTGGACTCATTTATATTCGATCCCACACAAAACATACTTTTGGATTGGGAAATGCGATTTAACATAATCCGAGGAATTGCACAGGGTTTACTTTATCTTCACCAAGACATCAGGTTAAGAGTAATTCATAGAGATTTAAAGACCAGTAACATTCTTCTTGACGAGGAAATGCAACCAAAAATTTCAGATTTTGGATTGGCAAAAATAGTGGCAGGCAAAGAATCTGAGGCAAATACTGAAAGAGTTGTAGGAACCTAA 2145 0.4033 MNMDLDLKLTSWRSDNDPQSGSYAFMMASDGDNPYVIWKNNQLYWERGIKNPSPGSMFGTVVFLLNKTSTDEDPSSATNTPPYKNIGNRFGKKQSPITRVPVDEFNKTRLVMKCNGELQFLTWDGIQQDWIVRWKAPDSSCDKYNFCGNFASCDYNLINLNIKECKCLPGFSSVIGGVRGCTRNSWSCSGDTTAFLNLVKVKAREPPDEQHPAASETECKQICLNKCPECQAYSYDAKAATSESGDDNDSAQKSCRIWTEELVTLQEGFHGDDTDNNEDNDAHSFYVRVDISDIEPTPRTCEPCGTNMVPYPLSTSSNCGDPMYFNFSCNPSTGQLSFISRTSNSNATYQKVAIVYSESRKFVMQVHPSNTHCEDERPESDETMQIHSPFSVAYDCFDKAKVEVTWEPPHEPVCSEPKDCVGWNHSSCKVASGGKRCLCDKNYHWDGIALACTIADEGKSKSQISLILGITLGSLIILACAITFAYLWRRKITPKIGKESNVKQRKRFIDSIRHVKDLIEDGGLEEQDNEGIEVPYFDFESIVVATDNFSDANKLGRGGYGPVYKGKLQSGEIVAVKRLSNVSSQGLQEFKNEVVLIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFDPTQNILLDWEMRFNIIRGIAQGLLYLHQDIRLRVIHRDLKTSNILLDEEMQPKISDFGLAKIVAGKESEANTERVVGT 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00814 714 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 714 - -
Aip08g00814 714 Pfam Protein kinase domain 550 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00814 714 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 714 - -
Aip08g00814 714 ProSiteProfiles PAN/Apple domain profile. 188 282 IPR003609 -
Aip08g00814 714 Pfam S-locus glycoprotein domain 95 172 IPR000858 GO:0048544
Aip08g00814 714 Pfam PAN-like domain 188 263 IPR003609 -
Aip08g00814 714 PIRSF SRK 391 714 IPR024171 GO:0004674
Aip08g00814 714 PIRSF SRK 1 317 IPR024171 GO:0004674
Aip08g00814 714 ProSitePatterns Serine/Threonine protein kinases active-site signature. 670 682 IPR008271 GO:0004672|GO:0006468
Aip08g00814 714 SMART ntp_6 190 280 IPR003609 -
Aip08g00814 714 SUPERFAMILY Protein kinase-like (PK-like) 532 714 IPR011009 -
Aip08g00814 714 Gene3D Transferase(Phosphotransferase) domain 1 625 714 - -
Aip08g00814 714 SMART serkin_6 549 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00814 714 Gene3D Phosphorylase Kinase; domain 1 520 624 - -
Aip08g00814 714 ProSiteProfiles Protein kinase domain profile. 549 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00814 Aip-Chr8 8449423 8452955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00814 537 714 Receptor kinase-like Gene Family AT4G11530 64.045 6.48e-74 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g00814 Pkinase 1.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00814 - - aip:107612579 1473.76