Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00810 ATGCCTGCTTTGCCTCTCTCATTTACCCCTTCCGGAGATGATTGGAGTGATGCTGGCCGGAACCTTTTACGAACAGACCTCGTTTGGAGTATAGTGGTAGGAACAAAATGCAGGCGGCTAGTGAACCCTAGTTTCTTTGTCTTGTCGCTAAAACACTCGGGCCTCCTCTCAGGGTTTGCATTGCATGCAGAAATGTTGGGGAAAGGGAACACGAAGGGGGATGGTGGATCGAAGTCGGTAGCAAAAATACTTGCAAAATGGAAAGAGTACAACGCACAGCTTGATTCAAGCAGCGACGCCGATAAACCGATTCGGAAGGTTCCGGCGAAGGGGTCGAAGAAGGGGTGTATGAAGGGAAAAGGGGGACCTGAGAATTCGCGGTGTAACTACCGGGGAGTGAGGCAGAGAACTTGGGGAAAATGGGTTGCCGAAATTCGAGAGCCAAACAGAGGCAGCAGGCTTTGGCTTGGAACTTTCCCGACCGCCATTGGTGCTGCCCTTGCCTATGACGAAGCTGCCCGCGCTATGTACGGTTCTTGTGCCCGCCTCAACTTCCCCAACGTCTCTGTCTCCAGTTTCTCCCACCATTCTTCTTCTCCACCTGAAAACCACCACGATGATGATGTCATCTCGTTATCCTTAAGTGTAAAGCATGAGGCTGTGGAGGCTGAATCTGGGGGTAGTAACTCCCCTCCTTCTTCCTCCTGA 708 0.5184 MPALPLSFTPSGDDWSDAGRNLLRTDLVWSIVVGTKCRRLVNPSFFVLSLKHSGLLSGFALHAEMLGKGNTKGDGGSKSVAKILAKWKEYNAQLDSSSDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAALAYDEAARAMYGSCARLNFPNVSVSSFSHHSSSPPENHHDDDVISLSLSVKHEAVEAESGGSNSPPSSS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00810 235 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 71 223 - -
Aip08g00810 235 CDD AP2 128 187 IPR001471 GO:0003700|GO:0006355
Aip08g00810 235 PRINTS Ethylene responsive element binding protein signature 130 141 IPR001471 GO:0003700|GO:0006355
Aip08g00810 235 PRINTS Ethylene responsive element binding protein signature 152 168 IPR001471 GO:0003700|GO:0006355
Aip08g00810 235 Pfam AP2 domain 128 178 IPR001471 GO:0003700|GO:0006355
Aip08g00810 235 MobiDBLite consensus disorder prediction 98 124 - -
Aip08g00810 235 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 71 223 - -
Aip08g00810 235 SMART rav1_2 129 192 IPR001471 GO:0003700|GO:0006355
Aip08g00810 235 ProSiteProfiles AP2/ERF domain profile. 129 186 IPR001471 GO:0003700|GO:0006355
Aip08g00810 235 Gene3D AP2/ERF domain 129 188 IPR036955 GO:0003700|GO:0006355
Aip08g00810 235 SUPERFAMILY DNA-binding domain 129 186 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00810 Aip-Chr8 8416650 8418820 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00810 76 186 AP2-EREBP Transcription Factor Family AT2G40350 66.087 8.39e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aip08g00810 AP2 2.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00810 - K09286 adu:107462080 289.271