Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00806 ATGTCTACAGATCAAATGGCTCTTGTTATACAAGTAAGAGCTTCTTCGCTTTCAAGCTCAATTCATCATCCTCGTCACAATTCCATGCATCCACCATGGAACTTGTCGCTACAAACATCTAAAGGCCAAGGGACTCTTATGCATAGTAAAAAATTATCTATCAATTCCGTTCTTCTTCGTGAGAAGGCGGAGTGTCTTGAAAGTAATGATAGGAAGAAAAGCTTGGAGCAGGTGAAGAAAGAAGGGCAAGAAGCATTGCTAAAAAAGTCAAGCGATCCAGTGGGAACAATGAAAATAATTGATAGCATTCAAGAGCTGGGAATTGGGCACCATTTTGAAGAAGAGATCAATGCACTTCTTGGAAAGATATGCCACTGGGATGCCTCACAAGACCTATTTGCCACATCCCTTCAATTTCGCCTCCTCAGGCACAATGGCTGGACCACTTTTCCTGGTATTGCTATTGCCTTCTATTTTGGAGCCAGATTTGGGTTTGATAAAGCTGATATGAAACGCCTTTTCAATATGATTAATGAAGTGCCCACAATATTTGAAGTTGTTACTGGTGCAGCCAAGAAACAAGTGAAGGAGAAGTCTTCAGTTTCGAACCATAGTGGCAGCAAATCAAAGTCAAACACTAAAGCAGAAATTGTTGGTGAAGTTGAGTTTATTTGGCTACAGAGGTCGGAAGTGGAAGACTCGGAGTACTATTCAGAGGAGTTGGTCCGTGCCCCTGATCCAGTCGAAGGTCTCCATGTTGATGGTGAAGGGAGCGATGTAGGCGAGGAAGGGAGTGAGGGATTTGAAGGTGACGAAGGTTTTGAAGAAGAGTCAGAGATACATGATGAATTTGGGGATGAGTTCTATGACAACTGGGAAGAAAGGGCAACTGATGAAATTGCTGATCTAGGTTGTATGAATTTGAAGGAAATCACAGTGGAAGAGATTAAAAGTCTCCATTTTCCGGATCGGGAAGTCGCATTTTTATTCTACAACTTATATGCGAAAATGAATGGGTTTGTTGCTCGAAGGTATAGGTCTCGGCGTAATCTAAATAACGAGATGATACAACAATCTTTTGTATGCTTCAGGCAGGGCTTTCGGAAGGCAAGAATTTGTGATGGAGTCGAAGTTGCTGATCGGAAACGGGAGCCGAAGCCAGAGACTAGGTGTGGCTGTGAGGCAGAAATGCGTGTCCATATCGACAAGGATAGTGGCAGATGGATTGTAACATACTTCCAGGAAGTTCATAATCACAAGATGCTTGAGGACACACTTACTTTCATGCTTTCAGGACATAGAAGGATGAACTCGGCGACAATTGATCAAATGAATATGATGTTAAAAGTCGGCATCAAGACCCCACAGATTTATGCATCGTTTGTGCAGACAGCAGGCGGGTGTGAAAATGTTCCGTTTTTTAAGAGAGACATGTACAACAGAATTCACAACCAACGGAGGATTATTGGTGGGGATGCAAGTGCGTGCCTTATGTTGTTGCAACGTATGAAAGTAGAAAATCCGGGAATGTTTGTTAGACACCTAGCGGACAAAGAAGGTCGTTTGGTGCATTTATTTTGGTGTGATAACTGTAGTCAACTGGATTATGAAATATTTGGGGATGTATTAGTATTTAATGCGACATATTGCAAGAATAAGTACATGTGTCCGCTGGTGGTTTTCTCGGGGGTTAATCATCACAATCAAACAATCGTGTTTGCTGCTGCCCTTGTTGCGAATGAGACAGAGGAAACATATAAGTGGCTACTGCAGCAATTTTTAGAAGGCATGAAGGGCAAGGCACCCAAATGTGTCATCACTGATGGTCATAGAGCCATGAAGAAAGCAATTGAATCAATTTTTCCAAATTTGTATCATCGTCTATGTGCATGGCACTTACTCCGAAATGCGACCTCAAACAAAAGCAATCCTGTGTTCTCATCTGAATTCAAGAAATGTATGTTATTTGACTATGAAGTGGCAGAGTTCGAAGAGCACTGGAATAATGTGGTTTCTGAGCTAGGCCTACAAGATAATCCCTGGGTGTGTGATCTATATGCTAGAAGACATATGTGGGCAACTGCACACATCCGTGGTAATTTCTTTGGGGGCTTCCAAACCACGTCAAGATGTGAGGGGATTCACTCTATGCTCGGCAAGTTTGTGCATTCCCGGCACAACTTAAAAGACTTTGTTGAGCAATTCTTTTGA 2211 0.4233 MSTDQMALVIQVRASSLSSSIHHPRHNSMHPPWNLSLQTSKGQGTLMHSKKLSINSVLLREKAECLESNDRKKSLEQVKKEGQEALLKKSSDPVGTMKIIDSIQELGIGHHFEEEINALLGKICHWDASQDLFATSLQFRLLRHNGWTTFPGIAIAFYFGARFGFDKADMKRLFNMINEVPTIFEVVTGAAKKQVKEKSSVSNHSGSKSKSNTKAEIVGEVEFIWLQRSEVEDSEYYSEELVRAPDPVEGLHVDGEGSDVGEEGSEGFEGDEGFEEESEIHDEFGDEFYDNWEERATDEIADLGCMNLKEITVEEIKSLHFPDREVAFLFYNLYAKMNGFVARRYRSRRNLNNEMIQQSFVCFRQGFRKARICDGVEVADRKREPKPETRCGCEAEMRVHIDKDSGRWIVTYFQEVHNHKMLEDTLTFMLSGHRRMNSATIDQMNMMLKVGIKTPQIYASFVQTAGGCENVPFFKRDMYNRIHNQRRIIGGDASACLMLLQRMKVENPGMFVRHLADKEGRLVHLFWCDNCSQLDYEIFGDVLVFNATYCKNKYMCPLVVFSGVNHHNQTIVFAAALVANETEETYKWLLQQFLEGMKGKAPKCVITDGHRAMKKAIESIFPNLYHRLCAWHLLRNATSNKSNPVFSSEFKKCMLFDYEVAEFEEHWNNVVSELGLQDNPWVCDLYARRHMWATAHIRGNFFGGFQTTSRCEGIHSMLGKFVHSRHNLKDFVEQFF 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00806 736 Pfam MULE transposase domain 542 636 IPR018289 -
Aip08g00806 736 Pfam Terpene synthase, N-terminal domain 70 148 IPR001906 GO:0010333|GO:0016829
Aip08g00806 736 Pfam FAR1 DNA-binding domain 330 422 IPR004330 -
Aip08g00806 736 Gene3D - 91 148 IPR036965 GO:0010333|GO:0016829
Aip08g00806 736 Pfam Alfin 153 189 IPR021998 GO:0006355|GO:0042393
Aip08g00806 736 Gene3D Farnesyl Diphosphate Synthase 68 90 IPR008949 -
Aip08g00806 736 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 317 728 IPR031052 GO:0006355
Aip08g00806 736 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 71 152 IPR008930 -
Aip08g00806 736 PANTHER OS02G0262500 PROTEIN 317 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00806 Aip-Chr8 8359154 8364495 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00806 153 214 Alfin-like Transcription Factor Family AT5G20510 64.516 3.82e-22 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g00806 MULE 1.6e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00806 - - ahf:112758016 944.11