Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00802 ATGCACGTAATGCATAGCATGAAAGCTGAGCTAAAAGGAGCATCCTCTATCTCCTTCCAAAACCACAGCCTCTTCAACACAGCACCACACAGTTCACTCACCGGAGCACTCAAAGGGTGTCTCGGAAGCCTCGACGGCGCGTGCATCGAGAAGCTTCTTCTCCACTGCGCAAGCGCCTTGGAGAGCAACGATGTAACCTTGGCTCAACAAGTGATGTGGGTCCTCAACAACGTTGCTTCACCAACCGGTGACACAAATCAAAGGCTCACATCATGGTTCCTCAGAGCACTGATCTCTAGGGCTTCAAGGATTTGCCCTACAGCCTTGAGTTTCAAGGGGAGTAGCAACAACATTCAGAGGAGGTTGATGACGGTTACCGAGCTAGCAGGATACGTGGATCTCATTCCATGGCACAGGTTTGGGTTTTGTGCTTCAAATAATGAGATTTTCAAAGCAATTTTAGGGTTCCAAAGGGTACATATCTTAGACTTTAGCATCACTCATTGTATGCAATGGCCTACTTTCATTGATGCTTTGGCCAAAAGCCCTGAAGGTCCTCCTTCACTTAGAATCACTGTCCCATCTTTTAGGCCACCGGTGCCTCCATTGGTGAATGTATCAACTCATGAGGTTGGCCTTCGGTTGGCGAATTTCGCGAAGTTTAGGGATGTCCCTTTTGAATTCAATGTCATAGGGAACAATTTAGGTCCCTTATTAGCACCTAATAATTCTGAATTAAGCAATGAATCAACTAGTTTTCATGTTGAGTCATTGCTGAGTCTATTGAATCCTAGTGTGCTAAACCTTAGGGATGATGAGGCTTTGGTCATAAATTGTCAAAATTGGCTTCGTTATTTGTCTGATGATAGAAAGGGAAACCACCGATGCCTTTCTCTCCGTGACGCTTTTTTGAGTTTAATTAAAGGTCTTAACCCTCAGATTGTGGTTTTGGTGGATGAGGATTGTGATCTTAGTTCACCAAGCCTCACATCAAGAATTGCAACATGTTTCAACCATCTGTGGATACCCTTTGATGCATTGGAGACTTTCTTGCCTAAGGACAGTTGCCAGAGGACAGAGTTCGAATCCGACATTGGACAGAAGATTGAGAACATCATAGGATATGAAGGGCATCATAGGATAGAGAGGTTGGAGTCAGGGATGCAGATGTGCCAGAGAATGAAGAATGCTGGTTACTTGAGCCTCCCATTTTGTGATGAAACGGTTATGGAAGTTAAGGGTTTGCTTGATGAGCATGCTAGTGGATGGGGGATGAAGAGGGAAGAAGGCATGTTGGTTCTCACATGGAAAGGAAACAGCTGTGTCTATGCCACTGCTTGGGTCCCCAGTGAAACCAGGGATCCTATTGGTTTCGATGCAACTATGGCATAA 1392 0.4519 MHVMHSMKAELKGASSISFQNHSLFNTAPHSSLTGALKGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPTGDTNQRLTSWFLRALISRASRICPTALSFKGSSNNIQRRLMTVTELAGYVDLIPWHRFGFCASNNEIFKAILGFQRVHILDFSITHCMQWPTFIDALAKSPEGPPSLRITVPSFRPPVPPLVNVSTHEVGLRLANFAKFRDVPFEFNVIGNNLGPLLAPNNSELSNESTSFHVESLLSLLNPSVLNLRDDEALVINCQNWLRYLSDDRKGNHRCLSLRDAFLSLIKGLNPQIVVLVDEDCDLSSPSLTSRIATCFNHLWIPFDALETFLPKDSCQRTEFESDIGQKIENIIGYEGHHRIERLESGMQMCQRMKNAGYLSLPFCDETVMEVKGLLDEHASGWGMKREEGMLVLTWKGNSCVYATAWVPSETRDPIGFDATMA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00802 463 Pfam GRAS domain family 50 447 IPR005202 -
Aip08g00802 463 PANTHER OS05G0500600 PROTEIN 8 449 - -
Aip08g00802 463 ProSiteProfiles GRAS family profile. 40 448 IPR005202 -
Aip08g00802 463 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 449 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00802 Aip-Chr8 8247494 8249773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00802 37 449 GRAS Transcription Factor Family AT3G49950 44.893 9.29e-117 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip08g00802 GRAS 4.2e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00802 - - gmx:100802093 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00802 08 8247494 8249773 Aip08g00802 08 8247494 8249773 ECH