Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00794 ATGAAGTTTACAAGACCTGTTTATGCTGTTTTTTTTGTCTTTCTTCTTTGTACCTTGGCCAAAATCGGCTTTGAAGGGAAACTGTGGAAACCCCAAGAGTTTTATGCAGATCATGGTGTTGTAATTAAGGAAGAGCAGGAGTGGATACATTGCAGGAAGGAATTGATAGAGAGGAACAATGATATTAAGGACTATGACTTGGAATCAAAAACAAACTTATTAGATTGCATTACAAGGACACATCCTCCAACTCATGATTCAGAAGAGAAGGAGCTTGATCATGTGTCAGTGTCACAGTTTTATTCCGAAGACAATCGCGGTAGATACTTGCTTGACAAGTTACCTCAGAGTGAGAAGAAACTACCAAGACCTGTTCCTGTTCCATCACCCAAAAAACTGCGTGTCAAGAAGAAGTTTGCCAACTCGCTTCCGCCTAAAGGGATAACACTAAGTGACATTTCTCCTTCTCCAAATTCTCCACCTATAGACTTTTATGTGCTATTTCCACCACCACCAGATTCACCTCCCCCTCCTCCTCCTCCTCAAGTTGATGAGGAGGATAATAGCGAACGAAAGATACCAATTATCATTGGTTCGGTTGTGTCAGGAATAATAATCATAGTAGGCATGCTCTTATGCTATCGTGAGATCAGGAAAAGCAGAAAAGCCTACAAAGATGACAGGCCTTTAACTGTATTAGGCTCAAGTGATGTGTCTGGTACTATTTCTAAGTTTATTGCTTTGGGAAATTCTAATACCAATGAAAATGGTATAATCTATGGAAAGAACCCTTCTATTGTTGGGAATGTTACCACTAGTCCTGAAGATAACAATGCCTCATTGGGTATGGGTGTTGGTGTGGGTTTGGGTGTGGCTGCGGGTGAGGCCTCATCATCAGAAAGCAAGGAACAAGTTCCATTAGGTCCTGCTCCAGAAGGATTAGCCCCTGAGCCGGCAGGGCCACCACCCCCACCACCTCCACCACCTCCACCCCCTGCTGCTNNNNNTAGGCCTCCACCTGCCCCTCCTGTTAAAATCCTTTCACGGGCACGTCTTAGTAATGTGGAAGAGGATTCTGCGGATGCTCCGAAAGCGAAACTAAAGCCATTTTTCTGGGATAAGGTTGCTGCATCTCCTGATCAAGCAATGGTCTGGCATGAGATCAGAGCAGGGTCATTCCAGTTCAATGAACAGAAAATCGAGTCTTTATTTGGCTGCAACAACCCCAATAGAAAAGAGTCAACATCACAAGAACCTTCATTACAGTTAATTCAGATTATTGATCCTAAGAAAGCACAGAATTTATCAATTCTTTTACGTGCTTTGAATGTGACTACAGAAGAAGTTGTTGATGCCCTTAGAGAAGGTAGCGAGATTCCTGTTGAGCTGATCCAAACATTAATAAAGATGGCGCCAACAACAGATGAGGAACTGAAGCTGAGGTTATTTGATGGAAACATTGCTCAACTTGGCCCTGCAGAGCGGTTTCTCAAGGTCTTAGTTGACATTCCACTCGCTTTCCGACGTCTCGAGTCTCTACAACTCATGCTCACTCTTCCAGAAGAGGTCTCAAGCATCAAGGAGTGCTTTTCAACATTAGAGGTTTCATGTGATAAACTAAGAAAAAGTAAGCTTTTCCTTAAACTACTAGAAGCAGTTCTCAAGACAGGAAACAGATTGAATGATGGAACATATCGCGGCGGCGCTCAGGCCTTCAAGCTTGACACACTTTTGAAGCTTTCGGACGTAAAAGGAACCGATGGAAAGACAACACTTCTACACTTTGTGGTTCAGGAGATCATACGTTCAGAGGGAGTAAGAGCTTTGAGAACAGAGAGAGCGAGGCAGAGCAATTCTAGTGTCAGAACAGAGGATTCTGTTGATGATTCCATTGATCAAGAATCAGAAGAACACTACCGAAGACTTGGCCTTAAAGTAGTTTCAGGCCTAAGCAGTGAACTTGAAGATGTTAAAAGGGCGGCAATTATAGACGGCGATGCTCTAACGGCTGCAGTGTGGAAACTTGATCGGTTACTCAGCAAAAGTGAGGAGTTATTGAACAATGATTTGAAGAGCATAGATGAAGACAGCAACTTCAAGCGTTCCCTTGAAAATTTTGTGGACAAATCAAAAGCTCAAGTGTCATGGCTGTCTGAGGAAGAGAAGAGGATCATGGCTGAAGTGAAGGCTACAGCAGATTACTTCCATGGACAAGCAGGGAAAGATGAAGGCTTGAGATTGTTTGTAATTGTTCGCGATTTCTTGGTAATGTTGGACACAGTATGCAAAGAGGTGCAGTTAACAACACAGAAGCCAATGAAGATCTCTCATAAGAAAGAGGCTTCAAATTCGTCGTCGCCGCCAGTATCTCCGAATACTCAGCAGCAGTCTCCTTCTGATCTGCATAGAAGACTGTTTCCGGCCATAGCAGCGCGCAGGATCCATTGCTCTAGTTCAGATGAGGATGAGGATGAGGAAGAGGATAATTAG 2490 0.4341 MKFTRPVYAVFFVFLLCTLAKIGFEGKLWKPQEFYADHGVVIKEEQEWIHCRKELIERNNDIKDYDLESKTNLLDCITRTHPPTHDSEEKELDHVSVSQFYSEDNRGRYLLDKLPQSEKKLPRPVPVPSPKKLRVKKKFANSLPPKGITLSDISPSPNSPPIDFYVLFPPPPDSPPPPPPPQVDEEDNSERKIPIIIGSVVSGIIIIVGMLLCYREIRKSRKAYKDDRPLTVLGSSDVSGTISKFIALGNSNTNENGIIYGKNPSIVGNVTTSPEDNNASLGMGVGVGLGVAAGEASSSESKEQVPLGPAPEGLAPEPAGPPPPPPPPPPPPAAXXRPPPAPPVKILSRARLSNVEEDSADAPKAKLKPFFWDKVAASPDQAMVWHEIRAGSFQFNEQKIESLFGCNNPNRKESTSQEPSLQLIQIIDPKKAQNLSILLRALNVTTEEVVDALREGSEIPVELIQTLIKMAPTTDEELKLRLFDGNIAQLGPAERFLKVLVDIPLAFRRLESLQLMLTLPEEVSSIKECFSTLEVSCDKLRKSKLFLKLLEAVLKTGNRLNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGVRALRTERARQSNSSVRTEDSVDDSIDQESEEHYRRLGLKVVSGLSSELEDVKRAAIIDGDALTAAVWKLDRLLSKSEELLNNDLKSIDEDSNFKRSLENFVDKSKAQVSWLSEEEKRIMAEVKATADYFHGQAGKDEGLRLFVIVRDFLVMLDTVCKEVQLTTQKPMKISHKKEASNSSSPPVSPNTQQQSPSDLHRRLFPAIAARRIHCSSSDEDEDEEEDN 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00794 829 MobiDBLite consensus disorder prediction 773 829 - -
Aip08g00794 829 Pfam Formin Homology 2 Domain 360 758 IPR015425 -
Aip08g00794 829 MobiDBLite consensus disorder prediction 112 190 - -
Aip08g00794 829 MobiDBLite consensus disorder prediction 311 345 - -
Aip08g00794 829 PANTHER FORMIN-RELATED 1 824 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip08g00794 829 SMART it6_source 357 773 IPR015425 -
Aip08g00794 829 SUPERFAMILY Formin homology 2 domain (FH2 domain) 322 771 - -
Aip08g00794 829 ProSiteProfiles Formin homology-2 (FH2) domain profile. 357 784 IPR015425 -
Aip08g00794 829 MobiDBLite consensus disorder prediction 292 360 - -
Aip08g00794 829 PANTHER FORMIN-LIKE PROTEIN 1 824 - -
Aip08g00794 829 MobiDBLite consensus disorder prediction 162 183 - -
Aip08g00794 829 Gene3D Formin, FH2 domain 362 793 IPR042201 -
Aip08g00794 829 MobiDBLite consensus disorder prediction 779 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00794 Aip-Chr8 8055164 8058321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00794 321 814 FH2 protein (formin) Gene Family AT5G54650 53.737 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00794 - - tcc:18608541 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00794 08 8055164 8058321 Aip08g00794 08 8055164 8058321 ECH