Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00787 ATGTCTTCGTCCTCATCATCAATAATCTTCACTCCCAAAACCCTTATTCTCCTAATCAATACTCTTCTTCTTCTTCTTCTTGTCCAAACATGTCATGGAGCCGCCAATGACAACCCTCCTCTGTTCCATTTCTGTTCCAACACTGGAAACTACACACCCTACACCCCCTACGAATCAAACCTGAAAATTCTCATCAACTCACTCATCTACAAAACCCCTTCAACGGGTTTTGGCCAATTCCAGAACCAACAAGCCTACGGCCTCGCCCTCTGCCGCGGCGACGCCTCCGTTGGAGACTGCAAAACTTGTGTCACCGATGCAGCCAAAGAACTCCGCAGTCTCTGTCCGTACAACAAAGGTGCCATGATATGGTACGATAACTGCGAGGTCAAGTACTCGGACACAGATTTCTTTGGACAAGTTGATAACACTAATAGGTTCTATTTGTTGAACGTGCAAAACGTGAGTGATGCTGCAACATTCAACTATGTGGTTAAGGAGTTGTTGAGTTTGCTTGCTTCTAAGGCTTCTGAGGATCCTAAACTGTATGCTAGCGGAGACTTGAAGGTTGGAGAGTGTGAGAGAGTTTATGGGTTGGCTCAGTGCACCAGAGACCTTTCTAGCGTTGACTGCAACAACTGTCTTCATGACGCAATTCGCCAGCTTCCCAGTTGCTGTCATGGCAAACAAGGTGGTAGAGTTGTTGGTGGAAGCTGCAACATCAGATATGAGATCTACCCATTTCTCAATAAAGCTTAG 759 0.4611 MSSSSSSIIFTPKTLILLINTLLLLLLVQTCHGAANDNPPLFHFCSNTGNYTPYTPYESNLKILINSLIYKTPSTGFGQFQNQQAYGLALCRGDASVGDCKTCVTDAAKELRSLCPYNKGAMIWYDNCEVKYSDTDFFGQVDNTNRFYLLNVQNVSDAATFNYVVKELLSLLASKASEDPKLYASGDLKVGECERVYGLAQCTRDLSSVDCNNCLHDAIRQLPSCCHGKQGGRVVGGSCNIRYEIYPFLNKA 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00787 252 Pfam Salt stress response/antifungal 45 134 IPR002902 -
Aip08g00787 252 Pfam Salt stress response/antifungal 153 245 IPR002902 -
Aip08g00787 252 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 25 250 - -
Aip08g00787 252 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Aip08g00787 252 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38 25 250 - -
Aip08g00787 252 Gene3D - 39 137 IPR038408 -
Aip08g00787 252 Gene3D - 143 248 IPR038408 -
Aip08g00787 252 ProSiteProfiles Gnk2-homologous domain profile. 39 137 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00787 Aip-Chr8 7992790 7993548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00787 17 249 Pollen Coat Proteome AT4G20670 38.889 2.30e-52 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00787 - - aip:107610339 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00787 08 7992790 7993548 Aip08g00787 08 7992790 7993548 ECH