Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00785 ATGTGCAAAGGTCCACAAGGAAAAGGGCATGCCTCAACAAGAGGAATAGCTTCTTCTTCTTCTACATGTTGTTGTGAGTTATGTGGATTAAGGGCTTCATTGTATTGCCATGCTGATGATGCATATCTATGTAGAAAATGTGACAGATGGGTTCATGAAGCAAATTTCTTGGCCCTTAGACACATTAGATGCTTTCTCTGCAACACATGCAGCAATCTCACAAGAAGATGTGTTATTGGTGCTTCATCAGAGGTTATTCTTCCTGTTAATGTAAGTTGGGCCAATGGAAATCTTCCTAACAACAGCACCAACACAACAACAACAACATGTTCAAGGATAATGCATGATAACAATGATGATGGTGATGATGATATTGGTCTTTCCTTGTCTCTTTGA 396 0.3939 MCKGPQGKGHASTRGIASSSSTCCCELCGLRASLYCHADDAYLCRKCDRWVHEANFLALRHIRCFLCNTCSNLTRRCVIGASSEVILPVNVSWANGNLPNNSTNTTTTTCSRIMHDNNDDGDDDIGLSLSL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00785 131 SMART bboxneu5 20 66 IPR000315 GO:0008270
Aip08g00785 131 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 14 97 - -
Aip08g00785 131 CDD Bbox1_BBX-like 24 66 - -
Aip08g00785 131 PANTHER B-BOX ZINC FINGER PROTEIN 29 14 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00785 Aip-Chr8 7969633 7970373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00785 25 119 C2C2-CO-like Transcription Factor Family AT3G21890 47.368 2.31e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00785 - - aip:107610340 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00785 08 7969633 7970373 Aip08g00785 08 7969633 7970373 ECH
Aip08g00785 08 7969633 7970373 Aip03g01581 03 17869588 17870179 PCT