Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00784 ATGGAACCCATATGTGAATTTTGTGGGGTTGTAAGAGCTGTGGTGTATTGCAAGTCGGATTCTGCGCGCCTATGCCTGAACTGTGATGCATCTGTGCACTCTTCCAATCCCCTGTCAAGCCGGCATGCGCGCTCTCTCCTCTGTGATCTCTGCTATTGCCAAGCAGCTGTTGTTTGTTGTGTAGATCATAACATGTGTGTGTGTGAAGCCTGTGAATGGAACCAGAATGAGTGCTTATTGAGGGGACACGGCCGCCTGCTGTTGAAGTTCTATACCGGTTGTCCCTCTTTCGAGGACTTGTCTAGGCTCTGGTCCTTTGTGTTTGATGCTAACTCCTCATGTGGTGGTGGTGGTGGTTTGGAACCAATTAGTACACTATGTGTGGAAAGACCTGATAATGATGATGGTTTATTTGATTTGGTGAGTGACAAGTTGACTGAGATACAACCTTGCTTCAAATTCGAGCCTTGGACGGATCTGTCTCCCATGATTCCATCAAATCAAGATACCATGCAATTCTGCAAAGATCAAGCACTTTTTTCCCCTCCAGAATCAAACCAGCCAAAGCTGCAGGGATGTTCTAATTTCAACTATCTTGGAATCGATGAAGGAAATGGTTTATGTCCTTCTGCGGATTCCATTGAGGTAATCTCACTAATCCATTTAACTCTTGCATCATCATCAGTCCAACAAGATTTTGTAACCTTTCAGTCTCCGAGCATGACGCCGACCTTCCACAGTAATGTGAATTGTGCTCTTGTGAGTCCTATTTACAACAGAGACATGAATCTTGGATTCCCTCAGGGCCAAGTTCATTCGAGCATATCGATGGAATTATCCAGCATTGCTGGAGACAGTAGTGTTACTGATCTAGATTGTGAGTTGTCCAATGAGATACAATGCCCACAGAGAAGGGCCAAAGCTAAAATGAGATACAATGAGAAAAAGAAAACCCAAATGTTCGGCAAACAAATAAGATATGCATCTCGGAAAGCGAGGGCCGAGGCAAGAAAACAAGTGAAAGGTAGATTTGTTAAGACAGGAGAAGAATATGATTATGACTCTCTGCTGCAGAATAAGCTTGAATAA 1089 0.438 MEPICEFCGVVRAVVYCKSDSARLCLNCDASVHSSNPLSSRHARSLLCDLCYCQAAVVCCVDHNMCVCEACEWNQNECLLRGHGRLLLKFYTGCPSFEDLSRLWSFVFDANSSCGGGGGLEPISTLCVERPDNDDGLFDLVSDKLTEIQPCFKFEPWTDLSPMIPSNQDTMQFCKDQALFSPPESNQPKLQGCSNFNYLGIDEGNGLCPSADSIEVISLIHLTLASSSVQQDFVTFQSPSMTPTFHSNVNCALVSPIYNRDMNLGFPQGQVHSSISMELSSIAGDSSVTDLDCELSNEIQCPQRRAKAKMRYNEKKKTQMFGKQIRYASRKARAEARKQVKGRFVKTGEEYDYDSLLQNKLE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00784 362 CDD Bbox1_BBX-like 4 47 - -
Aip08g00784 362 ProSiteProfiles CCT domain profile. 305 347 IPR010402 GO:0005515
Aip08g00784 362 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 358 - -
Aip08g00784 362 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Aip08g00784 362 SMART bboxneu5 1 47 IPR000315 GO:0008270
Aip08g00784 362 Pfam CCT motif 305 347 IPR010402 GO:0005515
Aip08g00784 362 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 2 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00784 Aip-Chr8 7966801 7968208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00784 1 354 C2C2-CO-like Transcription Factor Family AT3G21880 35.052 2.39e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip08g00784 CCT 1.5e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00784 - - aip:107610341 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00784 08 7966801 7968208 Aip08g00784 08 7966801 7968208 ECH