Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00769 ATGGACGACATAGATCACTCTTCTTCTTCTTCTTCTTCTCAACATGTTTCTGCAAACTCTACAGAACAAGTGTCCAATCGAGCTTCCAAGGTTGAATTTTCGGAGGATGAGAAAACTCTTATTTCCAGGATGTATAAACTTGTTGGGGACAGGTGGCCCTTAATTGCCGGAAGAATTCCCGGAAGAACAGCTGATGAAATAGAGAAGTATTGGACTTCAAGATACTCATCAAGAAACGAATAA 243 0.4033 MDDIDHSSSSSSSQHVSANSTEQVSNRASKVEFSEDEKTLISRMYKLVGDRWPLIAGRIPGRTADEIEKYWTSRYSSRNE 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00769 80 CDD SANT 32 71 IPR001005 -
Aip08g00769 80 Gene3D - 32 80 - -
Aip08g00769 80 PANTHER TRANSCRIPTION FACTOR TRY-LIKE 8 77 - -
Aip08g00769 80 SUPERFAMILY Homeodomain-like 31 75 IPR009057 -
Aip08g00769 80 Pfam Myb-like DNA-binding domain 30 72 IPR001005 -
Aip08g00769 80 ProSiteProfiles Myb-like domain profile. 25 75 IPR001005 -
Aip08g00769 80 SMART sant 29 77 IPR001005 -
Aip08g00769 80 MobiDBLite consensus disorder prediction 7 28 - -
Aip08g00769 80 MobiDBLite consensus disorder prediction 1 34 - -
Aip08g00769 80 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 8 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00769 Aip-Chr8 7855505 7856865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00769 24 78 MYB Transcription Factor Family AT5G14750 41.818 1.42e-13 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip08g00769 Myb_DNA-binding 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00769 - - rcu:8264277 103.219