Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00768 ATGAACGACCTTCTTACTGATTCGTTTGCTGATGAAGGTAATCATGGTCAGCCTTCTAGACAAGGTGATATTGAAATGGGAATGCAGGTTCAGAGAAGCAACTCTGATCTGGGAATGGAAGCTTTTAATAAGCAGATCCATGAGGTCGACAAACAAATCGATAAGCTCTCTGGGCTACTTCAAAAGCTAAAGGAAGCTAATGAAGAATCAAAAGCCGTTACAAAAGCATCTGCTATGAAAGCTATCAAGAAGAGGATGGAGAAGGATATTGATGAAGTTGGAAAGATTGCACATGGTGTCAAAACAAAAATAGAAGCTATAAACAGAGATAACTTAAACAACAGAAAAAAGCCTGGTTGTGAGAAGGGAACGGGTATTGACAGAGCGAGGATGAATATGACAAATGCCTTAACTAAAAGGTTCAAGGATCTAATGACAGAGTTTCAGACTCTTAGACAAAGAATACAAGATGAATATCGTGAGGTTGTTGAGAGAAGAGTTATTACAGTCACTGGAACTAGGCCAGATGATGAGACAATTGATCACCTGATTGAAACTGGAAATAGTGAACAAATCTTCCAGAAGGCAATTTTAGAAGCAGGCCGAGGACAGGTTGTAAGCACAGTAGAAGAAATTCAGGAGAGACATGATGCTGTGAAAGAAATTGAGAAAAAGCTTCTTGATTTGCACCAGATTTATCTCGACATGGCAGTCTTGGTTGATGCTCAGGGAGAGATTTTAGACAACATCGAAAGCCAGGTGACAAACGCAACTGATCATGTTAGATTGGGAAACGATGCTCTTCAAACTGCAAAGAGTTATCAAAAGAGGTCAAGAAAATGCATGATCATTTCTGTTATACTGGTCTTGATCATCGCCGCCATTATCGTGATCCCCATTTTGAAAACAAGGAAGAAGTGA 921 0.3963 MNDLLTDSFADEGNHGQPSRQGDIEMGMQVQRSNSDLGMEAFNKQIHEVDKQIDKLSGLLQKLKEANEESKAVTKASAMKAIKKRMEKDIDEVGKIAHGVKTKIEAINRDNLNNRKKPGCEKGTGIDRARMNMTNALTKRFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDHLIETGNSEQIFQKAILEAGRGQVVSTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVTNATDHVRLGNDALQTAKSYQKRSRKCMIISVILVLIIAAIIVIPILKTRKK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00768 306 MobiDBLite consensus disorder prediction 1 25 - -
Aip08g00768 306 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 12 301 - -
Aip08g00768 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 209 271 IPR000727 -
Aip08g00768 306 Gene3D - 34 163 - -
Aip08g00768 306 Pfam Syntaxin 42 244 IPR006011 GO:0016020
Aip08g00768 306 Pfam SNARE domain 245 297 IPR000727 -
Aip08g00768 306 SMART tSNARE_6 204 271 IPR000727 -
Aip08g00768 306 Gene3D - 203 302 - -
Aip08g00768 306 CDD SNARE_syntaxin1-like 208 270 - -
Aip08g00768 306 SMART SynN_4 34 160 IPR006011 GO:0016020
Aip08g00768 306 PANTHER SYNTAXIN 12 301 IPR045242 -
Aip08g00768 306 Coils Coil 46 76 - -
Aip08g00768 306 CDD SynN 39 196 IPR006011 GO:0016020
Aip08g00768 306 SUPERFAMILY t-snare proteins 37 264 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00768 Aip-Chr8 7843073 7851271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00768 1 302 SNARE and Associated Proteins AT3G03800 59.603 1.91e-115 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00768 K08486 - gmx:100800991 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00768 08 7843073 7851271 Aip08g00768 08 7843073 7851271 ECH