LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g00760	ATGAAGTCGTTTGTTGTTTCCCACCTTGTGATTTGGACCATCTTTTGTGGTGGTATTTTCTGCAGTAGGCCTGCAAGTGTGAACATTGGTGCAGTCTTCACCTTCGATTCGGTCATTGGTAGAGCTGCAAAGGTGGCCATGAAAATGGCCGTTGATGATGTCAATGCTGACCCTAGAATCCTCAATGGCACCCACCTCAACTTGATAATGAAGGATGCTGCCTGCAGTGTCTTTCTGGGAGCTATTGGAGCTTTTCAGGCACTCGAGGAAGGGATCGTAGCAATGGTTGGTCCACAGTCGTCTTCTATAGCTCATATGGTATCTCAAATTGCTGATGCTCTCCATGTGCCTCTTGTCTCATATGGTGCCACTGATCCTACCCTGTCCTCCCTTCAGTTCCCTTACTTTTTTCGTACTATACAAAGCGACTTGGAGCAGATGATTGCGGTAGCTGATCTAATTGAATTCAATGAATGGAAGGAGGTCATTGCTGTATACTTGGATGATGATTATGGAAGAAATGGAATGTCGGCTTTGAGGGATGAACTTGAAAATAGGAGATTGAAAATTGCTCATAAGCTACCTTTGAGTATTCAGTTTGATCCAAATGAAATCACCACTTTGCTGAACCAATCCAAATTGTTTGGTCCTCGTGTGTATGTTGTTCATATCAACCTGGATCCAAAACTGAGATTTTTCAACATTGCCAACAAACTTGAAATGATGACCAAAGACTATGTTTGGCTAGTCACTGATTGGCTCTTTGCTACCTTAGATTCTTTCTCCCCAGTGAATCAGACCTCTCTCAGTGTTCTCCAAGGGGTTGTTGGTTTTCGTCAGCATATTCCAGATTCCCGAAAGAAGAGAGGTTTCGTTTCTCAATGGAGAAATGCACATAAAGGTATACCAAATGGTAGTTTGAATGCCTATGGATATTATGCTTATGATACAATATGGGCAGTTGCGCGATCAATTGACAGATTCATCAGATTGCATAATAATATTACCTTTGTAGTTAATCATAAGAATAAGCCATCTCACACACAAGGAAATGATCTTCAACTTGACAAGCTCAAAATCCTTGCTAGTGGATCTGATCTGGGCAGTATATTATTACAGTCAAATTTTACTGGTGTGAGTGGTCGAGTTCAGTTTAATTCAAACAGGAATATCATAAGTGGTGGTTATGATGTTATAAATATCAATCAGAATGCAATGACTACGGTTGGTTATTGGTCTAATTGCTCAGGATTTTCGGTCATCCCCGCTGAAAATCTTAAAACTAAGAAATGTAAAAGGTTAACTCAAGGTCATAAGCTTGGCAATATTACTTGGCCTGGTGGAGGGACAGAAAGACCGCGCGGCTGGGTGATTGCTGATAATGGAAGACCACTGAGAATTGGAGTACCACGTAGAGCAAGTTTTGTTGAATTTGTGACTGTGAAGGATCATCAAATTCTGGGGTACTGCATTGATGTCTTCAACAAGACCCTGGAATTTATTCCATATGAAGTTCCTTACCGTTTCATGCCTGTTGGGAATGGTAAATCAAATCCGAGCTATGATGAACTCGTGAAAAATGTTGCTGACAGTGTATATGATGCAGTTGTCGGCGACATTGCAATTGTGACGAACCGTACACAATATGTGGATTTTTCTCAGCCTTATGCAACATCTGGCCTTGTTATAGTGGCTCCTGTCGACAATGCAAGATCAAATGCTTGGGTGTTTCTCCAACCATTCACAGCAGATATGTGGTGTGCTACGGCTGCTTCATTCGTGATGATTGGAGTGGTTATATGGATTCTTGAGCACCGAGTCAATGATGACTTCCGTGGTCCTCCTAAGAGACAACTGGTGACAGCGTTTATGTTCAGCCTCTCAACACTGTTTAAGACAAACCAGGAACGGACGATAAGCTCGCTATCCAAAATGGTGATGATAGTCTGGCTTTTCCTATTGATGGTGATCACTGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGCAGCTCTCATCGCCCATCACAGGAATCGATAGCTTGATTGCGAGCAATTGGCCCATAGGATACCAAGTAGGATCTTTTGCTTACAGCTATCTTACGGATAGTCTTTATATATCAAAATCAAGACTTGTTCAGCTAGGCTCTCCGGAGGAATATGCTAAAGCTCTGAAGAAGGGGCCGTCTAATGGAGGGGTGGCGGCTATCATCGATGAGCTTCCTTACGTGGAGTTATTTCTGTCAAAAGAAACCGGGTTTGGTATCATTGGACAGCCATTTACCAAAAGCAGTTGGGGATTTGCTTTCCAAAAAGAGTCTCCTCTCGCCCTCGACATGTCCACGGCTATTCTAAAACTCGCCGAGAGCGGAGAGCTCCAGAAGATACATGACAAGTGGCTCTGTAAGATGGGTTGCTCTGAAAAAACAACAAGCAACTCCAAGCCTGACCAACTTCACTTGATTAGTTTTTGGGGTCTGTATCTGTCATGTGGTGTTGTCACTCTCGCCTCGCTTTTGGTGTTTCTTCTGCGAGCGATTCGCCAATACGCTCGCTTCAAACGACGGGAAAAGGACATTGCTGTCGCCTCATCGTCGGAACCATCAAAGACCAGCAGCCATTGTTCCCAGGTTCTCCTTAACTTCTTCAACTTCATTGATGAAAAAGAAGAGGCCATAAAGAAAATATTCACTCAATGTGACAATCCTGAACCTCAAGTCAGATAA	2733	0.4296	MKSFVVSHLVIWTIFCGGIFCSRPASVNIGAVFTFDSVIGRAAKVAMKMAVDDVNADPRILNGTHLNLIMKDAACSVFLGAIGAFQALEEGIVAMVGPQSSSIAHMVSQIADALHVPLVSYGATDPTLSSLQFPYFFRTIQSDLEQMIAVADLIEFNEWKEVIAVYLDDDYGRNGMSALRDELENRRLKIAHKLPLSIQFDPNEITTLLNQSKLFGPRVYVVHINLDPKLRFFNIANKLEMMTKDYVWLVTDWLFATLDSFSPVNQTSLSVLQGVVGFRQHIPDSRKKRGFVSQWRNAHKGIPNGSLNAYGYYAYDTIWAVARSIDRFIRLHNNITFVVNHKNKPSHTQGNDLQLDKLKILASGSDLGSILLQSNFTGVSGRVQFNSNRNIISGGYDVININQNAMTTVGYWSNCSGFSVIPAENLKTKKCKRLTQGHKLGNITWPGGGTERPRGWVIADNGRPLRIGVPRRASFVEFVTVKDHQILGYCIDVFNKTLEFIPYEVPYRFMPVGNGKSNPSYDELVKNVADSVYDAVVGDIAIVTNRTQYVDFSQPYATSGLVIVAPVDNARSNAWVFLQPFTADMWCATAASFVMIGVVIWILEHRVNDDFRGPPKRQLVTAFMFSLSTLFKTNQERTISSLSKMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYSYLTDSLYISKSRLVQLGSPEEYAKALKKGPSNGGVAAIIDELPYVELFLSKETGFGIIGQPFTKSSWGFAFQKESPLALDMSTAILKLAESGELQKIHDKWLCKMGCSEKTTSNSKPDQLHLISFWGLYLSCGVVTLASLLVFLLRAIRQYARFKRREKDIAVASSSEPSKTSSHCSQVLLNFFNFIDEKEEAIKKIFTQCDNPEPQVR	910

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g00760	910	Gene3D	-	457	574	-	-
	Aip08g00760	910	CDD	GluR_Plant	463	803	-	-
	Aip08g00760	910	Pfam	Ligand-gated ion channel	804	835	IPR001320	GO:0015276\|GO:0016020
	Aip08g00760	910	PRINTS	Metabotropic gamma-aminobutyric acid type B receptor signature	40	56	-	-
	Aip08g00760	910	PRINTS	Metabotropic gamma-aminobutyric acid type B receptor signature	100	128	-	-
	Aip08g00760	910	PRINTS	Metabotropic gamma-aminobutyric acid type B receptor signature	314	326	-	-
	Aip08g00760	910	SMART	GluR_14	466	805	IPR001320	GO:0015276\|GO:0016020
	Aip08g00760	910	Gene3D	-	45	393	-	-
	Aip08g00760	910	PANTHER	GLUTAMATE RECEPTOR 3.7	13	908	-	-
	Aip08g00760	910	Gene3D	-	575	706	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g00760	Aip-Chr8	7742152	7746806	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip08g00760	21	904	Ion Channels	AT2G32400	56.194	0.0	1024

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g00760	K05387		-	gmx:100796389	1368.99

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip08g00760	08	7742152	7746806	Aip08g00760	08	7742152	7746806	ECH
	Aip03g01550	03	17361493	17366144	Aip08g00760	08	7742152	7746806	PCT

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