Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00754 ATGAAAGCAATCCAATTCCGTGTGCCTAGGTTGTACTATGACGCATTTCATCCCACAATCCACTTCCAGATACCATCATCATCATTATCACTCCCTAAACCAATGATCTCCCGCTACAGCATAGTCCAATCTCACCACCCCAACTTCACAATCTCATACCTGATTGACTCATGTGGTCTCTCTCCAGACACTGCTGCTCTTACTTCCCAAAAGCTTCACCTTCCTTCTGCTGAAAGACCAAACTCAATTCTCACCCTTCTCAGGGAGCATGGTTTCACAGATACCCAGATTTCAAACCTCATCAGAAAATGTCCATTGCTCCTCTTAGTAAACCCAGATATCCTCTTGCCAAAGTTTCAATTTTTCCTCTCCATTGGGATTTCCAATACCAACCTCGCAAGAACCCTAACCGCTGACCCAACCCTTTTGACCTGGAGCTTGGAGAAACAGATCATACCCTCTTACAATTTCCTCAAGAGTGTGTTGATTTCTGATGAAAAGGTTGCAGCTTCATTGAAGCGCACATCTTGGGTCTTCCTCGAGGATCACAAGAAGAACCTCGTACCAAACCTCAATCTCCTAAAAGAGATGGATGTTCCTGAATCATGTGTTATGCTGTTGCTTACTCATTTCCCGGAGGCATTGATGCAGAAAAAGGAAAACTTTGCAAAGCTTTCTAAGGAGATTAAAGAAATGGGGTTTAATCCAAAAAAGACAACATTTGTGTTGGCCATTCATGTGCTCTCAGGTGAGGGTAACAAATCCATATATAACCGCTGTTGCGAGGTTTATAAGAGGTGGGGTTGGTCAGATGATGACATCCTTATGGCATTCAAGAAGCACCCACTTTGTATGATACTTTCAGAGGATAAGATAATGAAGACAATGGATTACTTGGTGAATAAGATGAGTTGGCCTTCAGGGATGATTGTTAGGTGCCCAGTTGTGTTGTTTTTCAGCTTGGAGAAGAGGATTAAACCTAGGTGTTCTGTTGCTAAGGTTTTGTTGATGAAGGGATTGATTAAGAGGAAGTTGAGCTTGTCCACTTTGCTGTTGCCTGATGAGGACAGTTTCTTGGAGAAGTATGTGATCAAGTATGAGCTGCAGGTGAAGGGTGGTGGAACAAGGATTCAACGATGCTCCTGTTCGATCAACGCAACAGATCTGGGAAGGTAA 1176 0.432 MKAIQFRVPRLYYDAFHPTIHFQIPSSSLSLPKPMISRYSIVQSHHPNFTISYLIDSCGLSPDTAALTSQKLHLPSAERPNSILTLLREHGFTDTQISNLIRKCPLLLLVNPDILLPKFQFFLSIGISNTNLARTLTADPTLLTWSLEKQIIPSYNFLKSVLISDEKVAASLKRTSWVFLEDHKKNLVPNLNLLKEMDVPESCVMLLLTHFPEALMQKKENFAKLSKEIKEMGFNPKKTTFVLAIHVLSGEGNKSIYNRCCEVYKRWGWSDDDILMAFKKHPLCMILSEDKIMKTMDYLVNKMSWPSGMIVRCPVVLFFSLEKRIKPRCSVAKVLLMKGLIKRKLSLSTLLLPDEDSFLEKYVIKYELQVKGGGTRIQRCSCSINATDLGR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00754 391 Gene3D Transcription termination factor 3, mitochondrial 140 370 IPR038538 -
Aip08g00754 391 Pfam mTERF 84 236 IPR003690 GO:0003690|GO:0006355
Aip08g00754 391 Pfam mTERF 211 358 IPR003690 GO:0003690|GO:0006355
Aip08g00754 391 PANTHER CGI-12 PROTEIN-RELATED 30 370 IPR003690 GO:0003690|GO:0006355
Aip08g00754 391 SMART mt_12 307 338 IPR003690 GO:0003690|GO:0006355
Aip08g00754 391 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Aip08g00754 391 SMART mt_12 169 200 IPR003690 GO:0003690|GO:0006355
Aip08g00754 391 SMART mt_12 98 128 IPR003690 GO:0003690|GO:0006355
Aip08g00754 391 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Aip08g00754 391 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Aip08g00754 391 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 30 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00754 Aip-Chr8 7629898 7631073 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aip08g00754 mTERF 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00754 K15032 - ahf:112805356 468.003