Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00744 ATGATCTCCAATATTAACAAGAACAATGAGGATGGTAAGTCTTGGAGAGATGATTTGAGAAAGGGGCCTTGGACGCCGATAGAGGATGCCATACTTATCGAGCAGGTAAAGAAGTGTGGCGAAGGTAATTGGAGTTTAATTCAAAAGAATTCTGAGTTGAGGAGAAATGGCAAAAGTTGTAGGCTTAGATGGTTGAACCATCTCAGGCCTGACTTGAAGAAGGGTCCTTTCTCTGAAGAAGAGGAGAAACTCATCGGTGATCTTCATGCTAAGATTATATATTAA 285 0.407 MISNINKNNEDGKSWRDDLRKGPWTPIEDAILIEQVKKCGEGNWSLIQKNSELRRNGKSCRLRWLNHLRPDLKKGPFSEEEEKLIGDLHAKIIY 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00744 94 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 92 - -
Aip08g00744 94 Gene3D - 21 73 - -
Aip08g00744 94 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 8 92 - -
Aip08g00744 94 MobiDBLite consensus disorder prediction 1 20 - -
Aip08g00744 94 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
Aip08g00744 94 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 72 IPR017930 -
Aip08g00744 94 SMART sant 20 70 IPR001005 -
Aip08g00744 94 Pfam Myb-like DNA-binding domain 24 84 - -
Aip08g00744 94 SUPERFAMILY Homeodomain-like 22 91 IPR009057 -
Aip08g00744 94 CDD SANT 23 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00744 Aip-Chr8 7401150 7401434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00744 16 92 MYB Transcription Factor Family AT3G11440 66.234 4.61e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aip08g00744 Myb_DNA-bind_6 2.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00744 K09422 - ahf:112771967 167.933