Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00734 ATGTTTGTCACCGCCATAAGCGATGTCGTTGTTGCTGGCCTCCGATTGTGCTTCTGCGATTTGCCTCCTCCATCACTTCATCGACCTCAAGGAGCGTTATACGCTGCAGGGTTATTTCAAGTAGAAACTATACGAGCAAAGACATCAACTTTGGCGTTGGAGCTCGTGTTGCAATTCTTCAGGGGTCGTAATGTGATTATTGAGAAAAGTTATGGGAACCCAAGGATCACAAATGATGGTGTGACAGTAGCTAAGAGTATCAAATTTCAGGATAAGGCTAAGAACATTGGTGCTGATCTTGTTAAGCAGGTTGCCAAGGCTACCAACGCTGCTGCTAGAGCTGGTACAACTTGTGCAGGCAATACTGACAGAAGGGCAGTAATGATAAGCACACCTGAAGAGATAACCCAGAGTCAAACAATGGACGCAAGACGAAAAAGGGCCACTCTGAAAGAGACTAATGCAGCATTAAAGGATCAGTCCATGGAAGAACAAGAGGAAGATCCAGAGGTTCCATTATATGACCTAACAGTTATAGCTTCTTCCACTGATAACTTTTCACACAAAAATAAGCTTGGAGAAGGTGGTTTTGGACCTGTGTTTAAGGGAACATTAGAAAATGGGCAAAGAATTGCAGTTAAGAGACTTTCAGCTAGTTCCGGACAAGGGATCAAGGAATTTAAAAATGAAATTGCCTTGATAGCCAAACTTCAGCATCGCTTAGGGTGTTCGTTAGTGGGTACCTTCTTGAAATCACTTGTGAATGCATCCCTGGTTGCCAAGAAGGATGACATCAGTTCAGGAGCAAATTTGTTAGCTTCAGTTGAAATCCTTGTGTCTGGAGTATGCTTCTTGAAAGATTTTGTGAAAGATTTTGTGAAAGATTTTGTGTTTCCATCGTTTCAACGAGCAAATACTGCTATTGATGATGAAGAGCAGTTGGTATTGCAAAAAGATTATAATGGTGATATTGGGGAAGGGCGCCGACTTGAGattactgataataacttggaacaaagattttacaaggatttacCTATGGATAATTCCAAGTGGGATGATGCCATTGACCAACTCCAACATCTTCCAGAATCTGTGTTGAATCTATTGACCTGCATTGACCCTTCCACATATTATGGTCTCGAACCTTACTTTAATAACTTGGAACCCATTGTCAACAACGAGGATCAACATGACCAATTGGATCCAACAAGACCATTAATTTTGCTTCCTGCATTCCTGGCATCTCCATTTTTAGATGTCCCACAGACAAAAAATATATCCTCTGCAGTGACCAAGGAAACAGGTGATAATTGTAACATTAGTGCTGATATTGTTTCAACTAAAAATGCAGGGTTTCCAAATGGTCACAGCCCTCCACCACCGAATCCTAACAATGGCCTTTCGCCACCATGTTTTCCAATCATGCAAGACTTTTATTCGGTTGTCAGGGTGATATCTGAGTACTAG 1470 0.4075 MFVTAISDVVVAGLRLCFCDLPPPSLHRPQGALYAAGLFQVETIRAKTSTLALELVLQFFRGRNVIIEKSYGNPRITNDGVTVAKSIKFQDKAKNIGADLVKQVAKATNAAARAGTTCAGNTDRRAVMISTPEEITQSQTMDARRKRATLKETNAALKDQSMEEQEEDPEVPLYDLTVIASSTDNFSHKNKLGEGGFGPVFKGTLENGQRIAVKRLSASSGQGIKEFKNEIALIAKLQHRLGCSLVGTFLKSLVNASLVAKKDDISSGANLLASVEILVSGVCFLKDFVKDFVKDFVFPSFQRANTAIDDEEQLVLQKDYNGDIGEGRRLEITDNNLEQRFYKDLPMDNSKWDDAIDQLQHLPESVLNLLTCIDPSTYYGLEPYFNNLEPIVNNEDQHDQLDPTRPLILLPAFLASPFLDVPQTKNISSAVTKETGDNCNISADIVSTKNAGFPNGHSPPPPNPNNGLSPPCFPIMQDFYSVVRVISEY 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00734 489 Gene3D Phosphorylase Kinase; domain 1 173 259 - -
Aip08g00734 489 SUPERFAMILY GroEL equatorial domain-like 61 119 IPR027413 -
Aip08g00734 489 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 97 240 - -
Aip08g00734 489 MobiDBLite consensus disorder prediction 455 469 - -
Aip08g00734 489 ProSiteProfiles Protein kinase domain profile. 186 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00734 489 MobiDBLite consensus disorder prediction 450 469 - -
Aip08g00734 489 PANTHER - 97 240 - -
Aip08g00734 489 Coils Coil 140 167 - -
Aip08g00734 489 Gene3D - 56 172 IPR027413 -
Aip08g00734 489 SUPERFAMILY Protein kinase-like (PK-like) 166 250 IPR011009 -
Aip08g00734 489 Pfam Protein tyrosine and serine/threonine kinase 188 250 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00734 Aip-Chr8 7210676 7217153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00734 174 251 Receptor kinase-like Gene Family AT4G23130 60.256 2.84e-22 98.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g00734 PK_Tyr_Ser-Thr 1.6e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00734 - - aip:107632959 244.202