Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00729 ATGCAAGTGGTGGCTTTGATGCAACAACACAAGCCAGAGGAGGAGGAGGAGAAGAAGCAAGACGCAGCTCCAAGACAGTTCATGGATCTTGGATTGGCCACTAACGGTGCTGAGACGGGGGAGGAGGCTTCGCTTTCTTCGTCGGAGAGGTCCAAGTCTCCAGAGAGGAAGAATGGAAGCAGTGATGATCAAGAAAAGAATAGCAGAGAGGATAGTCCCTCGGCTCCAAGAAATGTTGATCAAGCTGAAGCCACTATGAGAAAAGCCAGAGTCTCTGTTAGAGCTAGATCAGAGGCTCCAATGATGACGGATGGATGCCAATGGAGGAAATATGGGCAGAAGATGGCAAAAGGAAACCCATGTCCAAGAGCATACTACAGATGCACCATGGCTGCAGGTTGCCCTGTTAGAAAACAGGTACAAAGGTGTGCTGAGGACAGAACAATACTAGTAACAACATATGAAGGGAATCACAACCACCCTCTGCCACCAGCAGCAATGGCAATGGCACAAACAACATCTTCAGCAGCAAGAATGCTTCTCTCGGGATCAATGTCAAGCAGTGATGGCCTTATGAATGCTAACTTCCTAACAAGGACACTCCTTCCTTGCTCCTCAAGCATGGCCACAATCTCAGCCTCAGCACCATTCCCAACTGTCACTTTGGACCTCACTCACTCCCCTAACCCTTTGCAATTCCCAAACCACCAAAACCACTTCCAATTACCATTCCCTCACTCACCTAACCCTTCTTCATTGCTGCCTCACATCTTTGGCCACGCTCTTTATAACCACTCTAAGTTCTCAGGCCTTCAACTCTCTCAGGATGCTGATCCTTCTTCTCAGCCTCCCCCGCCGCCTCCTCCGCAGCTCGCAGATTCAGTTAGTGCTGCCACTGCTGCCATTGCAGCTGATCCTAACTTCACTGCTGCTTTGGCAGCTGCTATTACTTCCATTATTGGAGGTGCACAACACCAAAACAATAATGGCAACACCAACAATAGCACTGTTGCTAATAATGGCAACAACACTAGTACTCCCAACAACAATACCAATGGAAGCAATAATAATATCAACAGTTCCAATTTCTCATCAGAGAACTAG 1104 0.4792 MQVVALMQQHKPEEEEEKKQDAAPRQFMDLGLATNGAETGEEASLSSSERSKSPERKNGSSDDQEKNSREDSPSAPRNVDQAEATMRKARVSVRARSEAPMMTDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILVTTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSSDGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTHSPNPLQFPNHQNHFQLPFPHSPNPSSLLPHIFGHALYNHSKFSGLQLSQDADPSSQPPPPPPPQLADSVSAATAAIAADPNFTAALAAAITSIIGGAQHQNNNGNTNNSTVANNGNNTSTPNNNTNGSNNNINSSNFSSEN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00729 367 Gene3D WRKY domain 87 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip08g00729 367 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 344 IPR044810 GO:0003700
Aip08g00729 367 SUPERFAMILY WRKY DNA-binding domain 95 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip08g00729 367 ProSiteProfiles WRKY domain profile. 97 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip08g00729 367 MobiDBLite consensus disorder prediction 9 24 - -
Aip08g00729 367 MobiDBLite consensus disorder prediction 1 96 - -
Aip08g00729 367 MobiDBLite consensus disorder prediction 272 293 - -
Aip08g00729 367 Pfam WRKY DNA -binding domain 104 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip08g00729 367 MobiDBLite consensus disorder prediction 48 73 - -
Aip08g00729 367 MobiDBLite consensus disorder prediction 327 367 - -
Aip08g00729 367 PANTHER OS05G0567200 PROTEIN 1 344 - -
Aip08g00729 367 SMART WRKY_cls 102 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00729 Aip-Chr8 7145661 7147396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00729 1 334 WRKY Transcription Factor Family AT1G62300 55.733 5.12e-113 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip08g00729 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00729 - - aip:107613963 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00729 08 7145661 7147396 Aip03g01503 03 16521584 16524574 PCT