Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00717 ATGGACATGATGGGAACCGAACGTGTTTGTTATGTTTACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGTAGCAGTTTGCTGACCATAGTGACAGTTAGATGTGGGCATTGTGCCAATCTGCTATCAGTTAACATGGGAGCATCTCTTCAAACATTGCCTCCTCAAGACCCTCACCATCATCAGTCACAGAAGCAGCACCTGAGCTTCCAAGATCCAAGCAGCAAGGAACTGGGATCATCCTCATCAAGATGCAACAAGTTATCAGCAGCATTTGATCCTGTAGACCATGATCCCCAACCTAGGATCCCTCCCATTCGTCCTCCGGAAAAGAGACAACGTGTTCCTTCTGCTTATAACCGGTTCATTAAGGAGGAAATCCAAAGAATTAAGGCTAGCAATCCAGACATAAGCCACAGGGAAGCTTTCAGCACAGCAGCCAAAAATTGGGCTCATTTCCCTCACATTCACTTTGGATTAAAGCTGGATGGAAACAAACAAGCAAAGTTGGACCAAGGGGAAGGGACTCAAAAGTCTAATGGATTCTACTGA 561 0.4563 MDMMGTERVCYVYCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQTLPPQDPHHHQSQKQHLSFQDPSSKELGSSSSRCNKLSAAFDPVDHDPQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDQGEGTQKSNGFY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00717 186 MobiDBLite consensus disorder prediction 70 91 - -
Aip08g00717 186 SUPERFAMILY HMG-box 108 156 IPR036910 -
Aip08g00717 186 Pfam YABBY protein 6 163 IPR006780 GO:0007275
Aip08g00717 186 PANTHER PROTEIN YABBY 6-RELATED 1 186 IPR006780 GO:0007275
Aip08g00717 186 MobiDBLite consensus disorder prediction 55 118 - -
Aip08g00717 186 PANTHER AXIAL REGULATOR YABBY 2-RELATED 1 186 - -
Aip08g00717 186 Gene3D High mobility group box domain 108 175 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00717 Aip-Chr8 6907440 6916400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00717 4 186 C2C2-YABBY Transcription Factor Family AT1G08465 65.946 1.19e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aip08g00717 YABBY 1.8e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00717 K25796 - gmx:100785458 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00717 08 6907440 6916400 Aip03g01476 03 16168492 16178628 PCT