Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00714 ATGGATCATCTCTTGATCCGCAAGTTCCGCCACCGCTTACTTGCATGGCTTCACCGATCTCGTTCCGGTAGGGTGTTCTTTGTGAGGAGAATTCCGTACAAGGATGTTAAAAGGGCAACTGATGGTTTCCAGAGAGTCATTTATAGCAACTCTGAGGTTACTGCATATGCTGCCAGGTTTGGTGAGGGTGGTGGTGGTGTGTTTTTGGTCAAGGAAGTGAAAGATTTTGGTCAACAAAATGATGTTTTCTGCAGACAGATTCAATTCTTGGGGCGCTTGCATCATCGCCATCTTCTCTCCCTCAAAGGGTTTTCTGTGGGAAAAGATAAGAGACTGCTCATATTCGATAACATAGAGAATGGAAGCTTAAAGGAGCATCTCAATGATCCCTTGAAGACTCCCTTAAATTGGAGGACCAGGTTGCAGATTGCTAATGAAGTTGTGGCAGCACTGGAATACTTGTTTCTTTTCAGTGATCCACCGGCATATCATGTCTCCATCAGCTCGAGCAATATTATGTTAGATGAGAACTTTGCAGCTAAACTATCAGATTTTGGCCTTCTTACTCCCAATGCAAACTCTGTCATGATGCCGAATTCAGGAGATAGCATGAAGCAGAAGAGTTGCAAGATCATATTCCAACTCGGAGTGCTGATACTGGAATTGGTCACCGGCCAATCTTCAGAGATGGAAGGTTCAGATTTAATCCCATGGATCCAACAATCCCGATTTTACAATTCCATAGATAAGATGATAGACCCTGATCTTGGAAACAATTATGACTGTACGGAGCTTAAAAATCTTCTAGCAGTGGCAAAATTATGTATCAAATCAAGGGACAAGGCTACATTTACAATCTCTCAGTTATTTCGGTATCTGCAAAGGAAGATTGATATTTCCCATGACAAGGTACGATAG 918 0.4248 MDHLLIRKFRHRLLAWLHRSRSGRVFFVRRIPYKDVKRATDGFQRVIYSNSEVTAYAARFGEGGGGVFLVKEVKDFGQQNDVFCRQIQFLGRLHHRHLLSLKGFSVGKDKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANEVVAALEYLFLFSDPPAYHVSISSSNIMLDENFAAKLSDFGLLTPNANSVMMPNSGDSMKQKSCKIIFQLGVLILELVTGQSSEMEGSDLIPWIQQSRFYNSIDKMIDPDLGNNYDCTELKNLLAVAKLCIKSRDKATFTISQLFRYLQRKIDISHDKVR 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00714 305 Gene3D Phosphorylase Kinase; domain 1 13 116 - -
Aip08g00714 305 PANTHER OS01G0253100 PROTEIN 4 298 IPR045271 GO:0004714|GO:0006468
Aip08g00714 305 Gene3D Transferase(Phosphotransferase) domain 1 118 304 - -
Aip08g00714 305 SUPERFAMILY Protein kinase-like (PK-like) 25 269 IPR011009 -
Aip08g00714 305 Pfam Protein tyrosine and serine/threonine kinase 69 191 IPR001245 GO:0004672|GO:0006468
Aip08g00714 305 ProSiteProfiles Protein kinase domain profile. 11 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00714 305 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00714 Aip-Chr8 6881348 6884903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00714 23 301 Receptor kinase-like Gene Family AT3G19300 36.964 1.07e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Aip08g00714 PK_Tyr_Ser-Thr 7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00714 - - aprc:113853565 454.907