Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00713 ATGTTCTCGCGCCAGTTGATGTTTGGGAGGGCGCCAAAGAAGAGCGATAACACCAAGTACTATGAGATCCTCGGAGTATCGAAGGAGGCTTCGCAGGACGATTTGAAGAAGGCTTACAAGAAAGCCGCCATCAAGAATCATCCTGACAAAGGAGGTGATCCTGAGAAGTTTAAAGAGCTGGCACATGCTTATGAGGTGCTGAGTGACCCGGAGAAGCGTGAGATTTATGATCAATATGGTGAAGACGCACTTAAGGAAGGAATGGGTGGCGGTGGTGGTGGCCATGATCCATTTGATATCTTCCAGTCTTTCTTCGGGGGAAGTCCATTTGGCTCCGGTGGTGGCGGCAGTAGAGGCCGGAGGCAGAGACGTGGCGAAGATGTGGTTCACCCCCTGAAGGTCTCTTTGGAGGACCTTTACCTTGGGACTTCAAAGAAGCTTTCTCTTTCACGGAATGTCTTGTGTTCTAAATGCAACGGGAAAGGGTCGAAATCTGGAGCTTCAATGACATGTGCTGGCTGTCAAGGTACTGGTATGAAGGTTTCCATTAGGCACCTTGGTCCCTCTATGATTCAGCAAATGCAGCATCCTTGCAATGAATGCAAGGGTACTGGAGAAACAATCAATGAGAAAGACCGGTGCCCACAATGCAAGGGCGAGAAAGTCGTCCAAGAGAAGAAAGTGCTCGAGGTCCATGTGGAGAAGGGAATGCAGAACGGGCAGAAGATTACATTCCCTGGTGAAGCTGATGAAGCACCCGATACAGTCACTGGAGATATTGTCTTTGTCCTTCAACAGAAGGAACATCCCAAGTTCAAGAGAAGGGATGAAGACCTCTTTGTTGAGCACTCGCTGTCCCTGACTGAGGCTTTGTGTGGCTTTAAGTTTGTGCTCACTCACTTGGATGGGCGGCAACTTCTCATCAAGTCAAATCCTGGTGAAGTTATTAAGCCTGATTCTTACAAGGCAATAAACGATGAGGGAATGCCAATGTACCAGAGGCCCTTCATGAAGGGGAAGCTTTACATTCACTTCTCGGTAGAATTTCCTGAATCTCTGATCCCTGATCAGGTGAAAGCTTTGGAAGCTGTTCTGCCACCAAAACCTACTTCACAGTTGACTGACATGGAGCTGGACGAGTGCGAGGAGACCACACTGCACGATGTGAACATGGAGGAAGAGATGAGGAGGAGGCAACAGGCTCAGCAGGAGGCATACGACGAGGACGATGATATGCACGGTGGTCATCAGAGAGTACAGTGCGCTCAGCAGTGA 1275 0.4925 MFSRQLMFGRAPKKSDNTKYYEILGVSKEASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFQSFFGGSPFGSGGGGSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCNGKGSKSGASMTCAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINEKDRCPQCKGEKVVQEKKVLEVHVEKGMQNGQKITFPGEADEAPDTVTGDIVFVLQQKEHPKFKRRDEDLFVEHSLSLTEALCGFKFVLTHLDGRQLLIKSNPGEVIKPDSYKAINDEGMPMYQRPFMKGKLYIHFSVEFPESLIPDQVKALEAVLPPKPTSQLTDMELDECEETTLHDVNMEEEMRRRQQAQQEAYDEDDDMHGGHQRVQCAQQ 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00713 424 SUPERFAMILY HSP40/DnaJ peptide-binding domain 272 361 IPR008971 GO:0006457|GO:0051082
Aip08g00713 424 SUPERFAMILY HSP40/DnaJ peptide-binding domain 126 270 IPR008971 GO:0006457|GO:0051082
Aip08g00713 424 CDD DnaJ_C 126 353 - -
Aip08g00713 424 MobiDBLite consensus disorder prediction 386 424 - -
Aip08g00713 424 SUPERFAMILY Chaperone J-domain 14 117 IPR036869 -
Aip08g00713 424 Gene3D - 155 221 - -
Aip08g00713 424 Gene3D - 117 267 - -
Aip08g00713 424 ProSiteProfiles dnaJ domain profile. 19 80 IPR001623 -
Aip08g00713 424 Gene3D DnaJ domain 16 116 IPR036869 -
Aip08g00713 424 Hamap Chaperone protein DnaJ [dnaJ]. 16 398 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Aip08g00713 424 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 152 224 IPR036410 -
Aip08g00713 424 SMART dnaj_3 18 72 IPR001623 -
Aip08g00713 424 Pfam DnaJ C terminal domain 129 350 IPR002939 -
Aip08g00713 424 ProSiteProfiles Zinc finger CR-type profile. 142 226 IPR001305 GO:0031072|GO:0051082
Aip08g00713 424 CDD DnaJ_zf 155 221 IPR001305 GO:0031072|GO:0051082
Aip08g00713 424 Pfam DnaJ domain 19 77 IPR001623 -
Aip08g00713 424 CDD DnaJ 20 69 IPR001623 -
Aip08g00713 424 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Aip08g00713 424 Gene3D - 269 351 - -
Aip08g00713 424 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 12 424 IPR044713 GO:0006457|GO:0030544
Aip08g00713 424 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 12 424 - -
Aip08g00713 424 Pfam DnaJ central domain 155 221 IPR001305 GO:0031072|GO:0051082
Aip08g00713 424 PRINTS DnaJ domain signature 52 72 IPR001623 -
Aip08g00713 424 PRINTS DnaJ domain signature 72 91 IPR001623 -
Aip08g00713 424 PRINTS DnaJ domain signature 21 39 IPR001623 -
Aip08g00713 424 MobiDBLite consensus disorder prediction 386 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00713 Aip-Chr8 6877977 6880438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00713 20 79 C2H2 Transcription Factor Family AT1G74250 46.377 3.69e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00713 K09503 - gmx:547558 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00713 08 6877977 6880438 Aip08g00713 08 6877977 6880438 ECH
Aip08g00713 08 6877977 6880438 Aip03g01469 03 16046036 16048101 PCT