Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00712 ATGGGTGTCTCAGGGAAATGGATTAGATCATTGATTGGTCTAAAGAAGTCTGAAAAGGCAGAGTCTTCTGAGAAGGACCGAAATAAGGTTGGCAAGTATCGGCATCAAAGAAAGCATTCGATTGAATTTGATAATGGTAAACTTCAAAATGAGCTTGATGATGATGTGACTCTGCCTATCAGAGATGATAATGATCGTTCAAACTCCGATGTCCATTATTCACCTTCTACTTCTCAACAAGCTCTTGATACTGCACATAATCACCAAATAATGAGGGAAGAATGGGCTGCCATTCGCATTCAAACAGCATTTCGAGGATTCCTGGCCAGAAGAGCACTAAGAGCTTTGAAAGGATTGGTAAGGCTTCAGGCCCTTGTAAGAGGCCATGCAGTAAGAAAACAAGCTGCAATAACATTGCGTTGCATGCAAGCTTTGGTGAGGGTTCAGGCTCGTGTTCGGGCAAGGCGTGTCCGCTTGGCATTGGAGAGTCAGAATGAACAACAGAAAGTTCAGCAGCAGCTTGCAAATGAAGCTCGTGTTCGAGAAATAGAAGAAGGCTGGTGTGACAGTGTGGGATCTGTAGAAGAAATCCAAGCTAAAATATTGAAGAGGCAGGAGGCTGCAGCTAAACGTGAGAGAGCCATGGCATATGCTCTAGCTCATCAGTGGCAGGCAGGATCAAGACACCAGGCTGCTTCATCTGGATTTGAACCAGATAAAAGTAGCTGGGGCTGGAATTGGTTGGAAAGATGGATGGCTGTTCGTCCTTGGGAGAACCGTTTTGTTGACACTAATCTAAGGGAGGGAGCAGTGGTACATGAAAATGGAGCAATGGATGGAAAAAATGGAACCAGTGCTAACAGCAAACAAATTCCGTCAAACAATCATCAAAAACCTGCAAGTCAGAAAGCTGGACCGATTCTTTCCGATGGCTGTGGTTCTTCACCTGGTAAGTCAGCAGGCTTGCAGGAAGTAGTGAACATTCAGGCTGTTAAGCCAAATGGTGAAAATGCTATTGAAGAAGCCAATTCAAAACCCAGGATTGGGTCAAGATCTCGTAGTAATCCAAAGGAGAGAACCTCACAAGGAGATAAGCAGGCCAAAAAACGATTATCTCTGCCTAACAGCGCAGGGGGAGGTCCTGGGGCTCAAACAGCAAGACATCCTAATAGAACAAATGTCAAAGGAACACTCAGCGCACAAAAGCTCGGTAGGGATAAACCTAAGGTCAATGGAAGAGGGGATGTAAATCTTACTCAGCCAGTTCCACAGCATGCAGACCACTCACAATCCCCGGTTTCACCCTCGCCACCGCAACCATCACCATCACCACGGCTCCACCACCACCACCACCTCCACCACCACCAATTGAGGCTGACACCAACCTCAATGTTGTCATCCCCATTCATCATCGCCTTCTCCCTCCTCCTCTCCCTTCCAATCCTCTTCTTCCTCGCACCACGAATCCTCCCTCCCCGTCACCTCAGTCCGCCCATTCCCGACTCCGACGAGATCGACGACGCCGCCCTCTTCCGCCGTGCAATCTCCCTCTCCCACCACCCCAACCAACCTTCTAGAACCTTCCACCTCTCCACAAAGAAGAACCCTTCTTTCAAAATCGCGTTCCTCTTCCTCACAAACACCGACATCCAATTCGCTTCCTTATGGGATCGCTTCTTTCACAACCAACCAACCAACCTTTACAACATCTACGTTCACGCAGACCCAACCGTGAACATCACGCGCCCCGATTCCGGCGTTTTCCACAACCGCTTCATTCCTTCCAAGAAAACCTACCGCGCTTCACCCACTCTCATCTCCGCCACGCGCCGGCTCCTCGCCACCGCGATCCTTGACGACCCTGCCAACGCATACTTCGCCGTCCTATCTCAGCACTGCATCCCTCTCCACTCGTTCCGCTACGTCTACCGCTCCCTCTTCGTCTCCAAAACCTTCGACAAATCCGAACCCGAACCTGAATCCGAACCGGGGATCCGAACCAAATACCGGAGTTTCATCGAGATCATCTCAAAGACGCCGAGGATGTGGAAGCGGTACGTGGCAAGAGGAAGGTACGCGATGATGCCGGAGGTTCCGTTCGAGAAGTTCCGGGTCGGATCGCAGTTCTTCACTCTGACCCGAAAACACGCTCTGCTTATAATCGCGGATCGGAAGCTATGGAAGAAGTTCAAGTTGCCGTGTTACAGAGAAGATGAGTGCTACCCTGAGGAGCACTATTTTCCAACTCTCTTGTCAATGGCGGATCCTGATGGTTGCACAAAATACACGCTAACGAGGGTGAATTGGACTGGCACTGTTAATGGGCACCCATATACTTATCGGAGCTCCGAGGTGTCTCCGGAGCTGATCGGGCGGCTGAGGGAGTCGGAGAACTCCGAATCGATTGAAAGGTTGAAAAGTTGA 2424 0.4971 MGVSGKWIRSLIGLKKSEKAESSEKDRNKVGKYRHQRKHSIEFDNGKLQNELDDDVTLPIRDDNDRSNSDVHYSPSTSQQALDTAHNHQIMREEWAAIRIQTAFRGFLARRALRALKGLVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVRLALESQNEQQKVQQQLANEARVREIEEGWCDSVGSVEEIQAKILKRQEAAAKRERAMAYALAHQWQAGSRHQAASSGFEPDKSSWGWNWLERWMAVRPWENRFVDTNLREGAVVHENGAMDGKNGTSANSKQIPSNNHQKPASQKAGPILSDGCGSSPGKSAGLQEVVNIQAVKPNGENAIEEANSKPRIGSRSRSNPKERTSQGDKQAKKRLSLPNSAGGGPGAQTARHPNRTNVKGTLSAQKLGRDKPKVNGRGDVNLTQPVPQHADHSQSPVSPSPPQPSPSPRLHHHHHLHHHQLRLTPTSMLSSPFIIAFSLLLSLPILFFLAPRILPPRHLSPPIPDSDEIDDAALFRRAISLSHHPNQPSRTFHLSTKKNPSFKIAFLFLTNTDIQFASLWDRFFHNQPTNLYNIYVHADPTVNITRPDSGVFHNRFIPSKKTYRASPTLISATRRLLATAILDDPANAYFAVLSQHCIPLHSFRYVYRSLFVSKTFDKSEPEPESEPGIRTKYRSFIEIISKTPRMWKRYVARGRYAMMPEVPFEKFRVGSQFFTLTRKHALLIIADRKLWKKFKLPCYREDECYPEEHYFPTLLSMADPDGCTKYTLTRVNWTGTVNGHPYTYRSSEVSPELIGRLRESENSESIERLKS 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00712 807 MobiDBLite consensus disorder prediction 70 85 - -
Aip08g00712 807 Pfam Core-2/I-Branching enzyme 540 793 IPR003406 GO:0016020|GO:0016757
Aip08g00712 807 MobiDBLite consensus disorder prediction 336 455 - -
Aip08g00712 807 MobiDBLite consensus disorder prediction 351 366 - -
Aip08g00712 807 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 465 801 - -
Aip08g00712 807 MobiDBLite consensus disorder prediction 280 302 - -
Aip08g00712 807 MobiDBLite consensus disorder prediction 37 69 - -
Aip08g00712 807 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 465 801 IPR044174 GO:0016757
Aip08g00712 807 MobiDBLite consensus disorder prediction 16 30 - -
Aip08g00712 807 MobiDBLite consensus disorder prediction 16 85 - -
Aip08g00712 807 SMART iq_5 92 114 IPR000048 GO:0005515
Aip08g00712 807 SMART iq_5 115 136 IPR000048 GO:0005515
Aip08g00712 807 Gene3D - 91 135 - -
Aip08g00712 807 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Aip08g00712 807 ProSiteProfiles IQ motif profile. 93 121 IPR000048 GO:0005515
Aip08g00712 807 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Aip08g00712 807 MobiDBLite consensus disorder prediction 275 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00712 Aip-Chr8 6835436 6842704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00712 1 413 IQD Protein Family AT3G22190 56.161 3.00e-116 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00712 - - adu:107461965 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00712 08 6835436 6842704 Aip08g00712 08 6835436 6842704 ECH