Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00705 ATGAGGCAGAGCATAGAAGCTCTGTTTTCTGGCGCGGTCCTTGGAAGGAACCCTTCCAGATCACCGGCGCTGGCTATGATAGGGCCAAGCAAGCACCAAGCAGTTGCCCTTGGAAGCGGAGCCGACTTATCAGCCTTCTACATGTGCAGTTTCGAGGGCTACCAAGACACACTCTACGCCCATTCCATGCGTCAATTCTACAGCGACTGCCACATTTATGGCACCGTTGATTTTATTTTCGGTAACGCCGCCGTAGTCTTCCAAAATTGCAACATCTTCCCCCGCCTCCCTATGACCGGCCAATTCAACTCAATTACCGCACAAGGCAGAACCGATCCCAACCAAAATACTGGAATCTCCATACACAACACAACGATTCGACCCGCTGACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTACCTTGGTAGGCCGTGGAAGCAATACTCGAGGATGGTTTTATGGAAAATTAAAAAAAAAACATTCATTTAA 495 0.4929 MRQSIEALFSGAVLGRNPSRSPALAMIGPSKHQAVALGSGADLSAFYMCSFEGYQDTLYAHSMRQFYSDCHIYGTVDFIFGNAAVVFQNCNIFPRLPMTGQFNSITAQGRTDPNQNTGISIHNTTIRPADDLAPRVGVVKTYLGRPWKQYSRMVLWKIKKKTFI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00705 164 ProSitePatterns Pectinesterase signature 2. 72 81 IPR033131 -
Aip08g00705 164 SUPERFAMILY Pectin lyase-like 28 156 IPR011050 -
Aip08g00705 164 Pfam Pectinesterase 27 158 IPR000070 GO:0030599|GO:0042545
Aip08g00705 164 Gene3D - 16 163 IPR012334 -
Aip08g00705 164 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 28 155 - -
Aip08g00705 164 PANTHER PECTINESTERASE 28 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00705 Aip-Chr8 6763779 6764755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00705 28 155 Carbohydrate Esterase AT4G02330 76.562 7.04e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00705 K01051 - gmx:100786124 227.639