Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip08g00704 | ATGGATAATGAAATTGAGGTTCCTGCACATTTTCTCTGCCCAATATCCCTTCAACTCATGAGAGACCCTGTAACCGTTTGCAGCGGTATCACTTACGACAGAGAGAACATAGAGAAATGGTTATTCTCATGCAAAAACGAATCATGCCCGGTTACCAAACAGTCCCTAATACAACACACAGATCTTGATCTTATTCTTACTCCAAACCACACCCTACGAAGGCTCATCCAATCATGGTGCACCGTAAACGCCTCTCTCGGAGTCGAGCGTATCCCTACTCCAAAACCGTCCATGGACGCATCGTCTCACATCGCCAAACTGATCTCCGAAGCGAAGCGATTCCCGGAGACTAAGGAGAATTGCCTCGCAACACTCAGATCCATGGCGTTCTTTGAAAGGAACAAGAGCTGTTTCGAGTCTTCAGGTGCAATAGAGTTCTTAGCTACAATCATGATGAAGAACAACAATCGCGCCGAAGAAGAAGAACGAGATCTAACTGAAGCTGCGATTGAGATCTTGTTTCATCTTGATCTCTCGGAAAATCAGATCAAGAAGCTAATCAACAACGAGTGCCTTCAGTTTCTTGAATCGTTGCTGCAAGCGTTGAAGCGTGGGAGCTGCCAATCAAGAGCGTACGCAACACTTCTTTTGAAATCGGCATTTGCGGTTTCAAATCCGATCCAGTTAATCAGCGCGAAAACCGAAATGCTGTTTGAAATCACGAGAGTGATACGCGATCGTATATCGCAGCAGGCTCATAAGGCGGCATTGAAGCTGGTGGTTGAGCTCTGTCCATGGGGAAGAAACAGAATCAAAGCGGTGGAAGCCGGCGCGGTGTCCGTGCTCGTGGAAGTGCTTCTTGATTCGACGGAAAGAAGAACGTGTGAGCTGGCGTTAATGGCGTTGGATCAGCTTTGCGGTTGCGCGGAAGGGCGCGCGGAGTTGGTGAAGCACGGCGCGGGAATCGCCGTGGTTTCGAAGAAAATATTGAGAGTTTCACGCGCCGCGAGTGACAGAGGAGTTAGGATATTAGCGTCGGTTTGTAGGTTCTGTGGAAGCGGGAGAGTAGTTCAAGAGATGATGCAGGTAGGAGCCGTTAACAAGCTGTGTTTGGTGCTTCAAGTTGATAGCGCTTTGAAGACCAAAGAGAGAGCTAAAGAGATTCTCAAGTTGCATTCTCTGATTTGGAAGAATTCAACATGTATTCCTCTACCTTTGTTATCATCGTATCCATGA | 1236 | 0.4749 | MDNEIEVPAHFLCPISLQLMRDPVTVCSGITYDRENIEKWLFSCKNESCPVTKQSLIQHTDLDLILTPNHTLRRLIQSWCTVNASLGVERIPTPKPSMDASSHIAKLISEAKRFPETKENCLATLRSMAFFERNKSCFESSGAIEFLATIMMKNNNRAEEEERDLTEAAIEILFHLDLSENQIKKLINNECLQFLESLLQALKRGSCQSRAYATLLLKSAFAVSNPIQLISAKTEMLFEITRVIRDRISQQAHKAALKLVVELCPWGRNRIKAVEAGAVSVLVEVLLDSTERRTCELALMALDQLCGCAEGRAELVKHGAGIAVVSKKILRVSRAASDRGVRILASVCRFCGSGRVVQEMMQVGAVNKLCLVLQVDSALKTKERAKEILKLHSLIWKNSTCIPLPLLSSYP | 411 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip08g00704 | 411 | ProSiteProfiles | U-box domain profile. | 6 | 86 | IPR003613 | GO:0004842|GO:0016567 | |
Aip08g00704 | 411 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 88 | IPR013083 | - | |
Aip08g00704 | 411 | ProSiteProfiles | Leucine-rich repeat profile. | 172 | 193 | IPR001611 | GO:0005515 | |
Aip08g00704 | 411 | CDD | RING-Ubox_PUB | 11 | 54 | IPR045210 | - | |
Aip08g00704 | 411 | PANTHER | WDSAM1 PROTEIN | 6 | 411 | IPR045185 | GO:0061630 | |
Aip08g00704 | 411 | SMART | Ubox_2 | 10 | 79 | IPR003613 | GO:0004842|GO:0016567 | |
Aip08g00704 | 411 | Coils | Coil | 151 | 171 | - | - | |
Aip08g00704 | 411 | Pfam | U-box domain | 7 | 82 | IPR003613 | GO:0004842|GO:0016567 | |
Aip08g00704 | 411 | Gene3D | - | 231 | 390 | IPR011989 | - | |
Aip08g00704 | 411 | SUPERFAMILY | ARM repeat | 104 | 217 | IPR016024 | - | |
Aip08g00704 | 411 | Gene3D | - | 96 | 226 | IPR011989 | - | |
Aip08g00704 | 411 | SUPERFAMILY | RING/U-box | 5 | 84 | - | - | |
Aip08g00704 | 411 | SUPERFAMILY | ARM repeat | 195 | 376 | IPR016024 | - | |
Aip08g00704 | 411 | PANTHER | OS11G0573500 PROTEIN | 6 | 411 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip08g00704 | Aip-Chr8 | 6714431 | 6715666 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip08g00704 | 1 | 411 | U-box Gene Family | AT2G35930 | 52.885 | 3.65e-148 | 425 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip08g00704 | - | - | gmx:100778012 | 572.392 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip08g00704 | 08 | 6714431 | 6715666 | Aip08g00704 | 08 | 6714431 | 6715666 | ECH | |
Aip08g00704 | 08 | 6714431 | 6715666 | Aip03g01459 | 03 | 15700375 | 15701894 | PCT |