Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00699 ATGGCAACGTACTTTCATGGAAGCAATTCTGAAATGCAATCTTCTTCGCCTTCAGCTTCCGCTTCTGGTGCAGATGGTGGCTTGCAGACACTTTACCTTATGAACCCAAACTACCACCACGTGCCCTATTCTGACGCGCCGACGCAAAACATGCTTCTTCTTAATCCTAACCACCAAGCCCACGCGCTCAACCTCGCCAACTTATCCCACGCGCCCCCTCCACCACACCACCAACTACTCATTCATCGACTTCCCAACTCCGACGACAACTCCCGGGCCTCTCTCTTCGGACACCACGACATCGCCACGGCTACCGCCCCGCCCACTTTCCACGGCTTCTCTGCGCCGCGCGTGCAGTACAATCTGTGGGGCTCTGTGGTCGACCAGCCTCAACCGTCGCCGTCCAGCAGCTCCGGAGGCGCCGACATGGGTTTCCGGCGGCCTACTCAGCAGGGCTTGTCGCTCAGCCTCTCCTCACAGCAGCAGCAGCAGCAGCAACAGCAACAAACAGGTACCTATAGGTCTCTCTCCGGCGAGGTTGAAGTTGCCGTTGCCGGAGGTGTCGGTAACTCGCCGTCATCGGCGTCGAACGGGATCTCGGGCGTGCAGGGTGTTCTGTTGGGATCAAAGTACCTGAAAGCCGCACAGGAGCTTCTTGACGAGGTGATGAACGTGGGCAATAAGGGAATTTCAAAGGAGGAGTTCGCAGAGAAGGTGAAGCCCAATAGGGAATCAAATTCTGGCGTCGGTGAAGGATCCAGTGGCGGCGGCGTCTGCGGCGGAGAGAACAGTGACGCCGGGAAGCATGTTGCTGAACTCACGACTGCTCAGAGACAAGAGCTTCAGATGAAGAAATCCAAGCTTGTCTGCATGCTCGATGAGGTGGAACAAAGGTACCGGCAATACCACCACCAAATGCAAGTTGTGATATCATCGTTTGAGCAAGCGGCGGGTTTCGGGGCGGCGAAATCGTACACGTCGCTAGCCCTAAAGACAATCTCGAAGCAATTCCGGTGCCTTAAGGATGCGATATCTTCACAGATAAGAGCAACAAGCAAGACATTGGGAGAGGATGATTGCTTAGGAGCTAAGGTAGAAGGTTCGAGGCTTAGGTATGTGGATCACCATCTTCGCCAACAAAGGGCACTGCAGCAACTTGGAATGATTCAACCCAATGCTTGGAGGCCACAAAGAGGCTTACCTGAACGCGCTGTTTCAATTCTTCGTGCATGGCTTTTTGAGCATTTCCTTCACCCTTATCCTAAGGACTCTGATAAAGTTATGCTAGCAAAGCAAACTGGACTTACTAGGAGCCAGGTGTCTAACTGGTTCATCAATGCCCGGGTTCGGCTATGGAAACCAATGGTTGAGGAAATGTACATGGAAGAAGTGAAGGAGCAAGAAATCAATAACAACAACAACAACAACGGTTCAGAGAGATCAAAGGAATCAAGCAAGGAGTTAGGTTCAGCTTCAAATGCTACTACTAATAATGGAGCTCCAGATAATAATAACAATAATAATAATCCAGTTCTTGATCCCATAAAAGTTCTTCATCAATCAAAACAAGAATGCTTCAACAACAACAGCTCTCCAACGGGGGCCGGCGAGATCTCGGTGAATTCTTCGTTGTCCACTTCTCCCATGGGTGGAGGAGTAGGATCCCTTCAATCCCACAGCGGTTTCCATCTTGCAGGTTCCTCTGACATGCAAATTAGGAGCCCAAACAAGGCTAGAAACGCTTCCGAAATTATGCATAACTCCCCAAGTAGTATCCTCTCAGTGGACATGGAAATGAAGCACATCAATGGGGATCATCATAGAGAACCCAATAGTATCACTGGTTATGGAGCTTTCTCAATGGAAGACATTGGAACCAGGTTCAGTAATGTCACTGATCATCATCATCATCATCATCATCATCAATTAGGTTCTTCAAGGTTCCAAGGCAACAATGGTGTGTCTCTCACCCTGGGGCTTCCACACAACGACAACACTGTTCCTATCTCCGCAACTCAACATGGATTTCTTCCACAGAATATGCATAGTTTGGGAAGGAGACTTGAGATTGGAAACAATGGCAATGAGTTTTGTGTGATCAACAATCCAAGTTCTTCTCACCCTGGACCTACCTATGAAAGCATTGACATTCAGAACAGAAAGAGGTTTGCTGCACAGTTATTGCATGATTTTGTGGCTTGA 2202 0.495 MATYFHGSNSEMQSSSPSASASGADGGLQTLYLMNPNYHHVPYSDAPTQNMLLLNPNHQAHALNLANLSHAPPPPHHQLLIHRLPNSDDNSRASLFGHHDIATATAPPTFHGFSAPRVQYNLWGSVVDQPQPSPSSSSGGADMGFRRPTQQGLSLSLSSQQQQQQQQQQTGTYRSLSGEVEVAVAGGVGNSPSSASNGISGVQGVLLGSKYLKAAQELLDEVMNVGNKGISKEEFAEKVKPNRESNSGVGEGSSGGGVCGGENSDAGKHVAELTTAQRQELQMKKSKLVCMLDEVEQRYRQYHHQMQVVISSFEQAAGFGAAKSYTSLALKTISKQFRCLKDAISSQIRATSKTLGEDDCLGAKVEGSRLRYVDHHLRQQRALQQLGMIQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEVKEQEINNNNNNNGSERSKESSKELGSASNATTNNGAPDNNNNNNNPVLDPIKVLHQSKQECFNNNSSPTGAGEISVNSSLSTSPMGGGVGSLQSHSGFHLAGSSDMQIRSPNKARNASEIMHNSPSSILSVDMEMKHINGDHHREPNSITGYGAFSMEDIGTRFSNVTDHHHHHHHHQLGSSRFQGNNGVSLTLGLPHNDNTVPISATQHGFLPQNMHSLGRRLEIGNNGNEFCVINNPSSSHPGPTYESIDIQNRKRFAAQLLHDFVA 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00699 733 Coils Coil 278 298 - -
Aip08g00699 733 Pfam Homeobox KN domain 411 450 IPR008422 GO:0003677|GO:0006355
Aip08g00699 733 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 21 682 - -
Aip08g00699 733 Pfam Associated with HOX 205 345 IPR006563 -
Aip08g00699 733 MobiDBLite consensus disorder prediction 525 585 - -
Aip08g00699 733 ProSiteProfiles 'Homeobox' domain profile. 391 454 IPR001356 GO:0003677
Aip08g00699 733 MobiDBLite consensus disorder prediction 125 174 - -
Aip08g00699 733 SMART prehox3 200 346 IPR006563 -
Aip08g00699 733 MobiDBLite consensus disorder prediction 1 23 - -
Aip08g00699 733 MobiDBLite consensus disorder prediction 236 263 - -
Aip08g00699 733 MobiDBLite consensus disorder prediction 468 513 - -
Aip08g00699 733 CDD homeodomain 394 455 IPR001356 GO:0003677
Aip08g00699 733 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 21 682 - -
Aip08g00699 733 SUPERFAMILY Homeodomain-like 395 461 IPR009057 -
Aip08g00699 733 MobiDBLite consensus disorder prediction 487 513 - -
Aip08g00699 733 SMART HOX_1 394 458 IPR001356 GO:0003677
Aip08g00699 733 Gene3D - 391 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00699 Aip-Chr8 6659668 6663888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00699 1 733 Homeobox Transcription Factor Family AT2G35940 42.803 1.17e-134 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aip08g00699 POX 4.2e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00699 - - gmx:100779075 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00699 08 6659668 6663888 Aip08g00699 08 6659668 6663888 ECH
Aip08g00699 08 6659668 6663888 Aip03g01451 03 15561598 15567210 PCT