Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00691 ATGGAAGGTAGCCACATCATGGCAGTGTTGTTCTTTCTCTTCTTTGGCCTAATTATGAGAATGTGTTATGGTGACACAGACCCAAATGATCTCAAAGTTCTGAATTCTTTCAGAAAAGGGTTAGAGAATCCTGAGCTTCTGAAATGGCCGGAAGATGGAGATGATCCATGTGGCCCTCCTTCATGGCCTTATGTGTTCTGCAGTGGTGATAGAGTCACTCAGATTCAGGCCAAGAATCTTGGACTCAGAGGAACATTGCCTCCAAATTTCAATCAGCTCTCAGAACTCTACAACTTGGGCCTTCAAAGGAACAATCTCACTGGGATGTTGCCTAGTTTCAGTGGATTATCTAAGTTGGAATTTGCTTTCTTGGATTACAATGCATTTGAAGCAATCCCTTCAGATTTCTTCAACGGACTTACCAGCTTGAGGGTTTTGTCTTTGGAAGAAAATCCATTAAATGGAACTACTGGTTGGTCATTTCCTCTTGATTTGGAAAAATCAGTGCAACTAACCAATCTTTCTCTTGTTAATTGCAATTTGGTTGGACCGTTGCCGGATTTCCTAGGCACATTGCCTTCCCTAACGAACCTGAGGCTTTCCGGGAACAGGCTATCCGGTAAGATTCCGGAAACTTTTGCTCAATCTTCTATCCAGGTTCTATGGTTGAACAATCAAGAAGGTGAAGGGTTAACGGGTCCTATTGATGTTGTTTCTTCAATGATTTTCCTAAGACAGCTTTGGCTACATGGAAATCAGTTCAATGGGAGAATTCCACATGATATTGGAAACCTTACTTCCTTGCAAGAGCTCAACCTCAATAGTAATCAACTTGTTGGCTTGATTCCTGAATCCCTAGCAGAAATGGAACTTGAGTTACTGGTGTTGAACAATAACATGTTAATGGGTCCAATACCAGAATTTAAGGCTGCAAATGTTTCTTATAATAACAATTTCTTTTGTCAAATTAAGCCAGGGCATGAATGTGATCCTCAAGTTACTGCACTGCTAGATGTTCTGGATAATCTGAACTATCCATTGTTTCTCATTTCGGATTGGTCAGGCAACAATCCATGCACTGGAAGCACAGAGAGCACAGGGCCATGGTTCGGATTGAGCTGCAATTCCAACCACCAGGTATCTATAATCAATTTGCCACGGCACGAGCTCAACGGTACTCTTAGTCCCTCACTTGCTAAGTTAGATTCATTACTTGAAATTAGGCTAGAAGGAAATAACATAACTGGCATGGTTCCTAGTAATTTTTCTGAATTGAAATCTTTGAGGTTGTTTGATTTAAGTGACAACCATCTTGAGCCCCCATTGCCAAATTTTCGCGAAGATGTTAAGGTTGTTATTGTGGGAAACCCTCTTCTTACTACTGAAAGTGGAGGAATGTCTCTGCCGCCTGAAAATTCACATCCTTCTCCAGACAACCTGTCACCCCCTTCATCCTCCTCTCATAAGGCACATGATCCCAATATGAATTCAAGTTCAAGTCAATCTAAACTGGATCATTCCAAAAGATTCAAGACAGTGGCAATTGTGTCTGGAATTACAGTCTTTGTAGTTGCTGTTCCTTTGGTTGTTTTCCTCTTCATTTGTTCCATGAAGAAGAAAAAGGCCTCCTTGGATGCTCCAAGTTCCATTGTGGTGCACCCGAGAGATCCATCCAATCGGGATAATGTGGTTAAAGTCACAGTCTCAGATACCACTACTGGAAGCTTATCAACTAAGACTGGGACAAGTTCTCTGAGTAACATTAGTGGTGAGACTCAAAACTCTCATATAATTGAGGCTGGAAACCTTGTCATTTCGGTTCAAGTCCTACGCAAGGTTACCAACAATTTCTCTTCAGAAAATGAGCTAGGCCGTGGAGGGTTTGGAACTGTGTACAAGGGTGAACTTGAAGATGGGACTAAAATAGCAGTGAAGAGAATGGAGCATGGTGTTATCAGCAGCAAGGCGCTGGAGGAGTTCGAAGCTGAAATCGCTGTTCTTTCAAAGGTTCGTCACAGGCATTTGGTATCTCTTTTGGGGTATTCCATTGGAGGCAATGAGAGACTTTTGGTTTATGAATATATGCCTCTTGGTGCTCTTAGCCAACATCTTTTCCATTGGAAAAACTTGAAATTGAAACCATTGTCTTTGTCACAAAGGCTTGCAATAGCTCTAGATGTTGCTAGAGGGATCGAATACCTTCATGGTCTTGCCTGCCAGACCTTCATCCATAGAGACCTCAAGTCTTCTAATATTCTACTTGGTGATGATTTCCACGCAAAAGTATCGGATTTTGGTCTTGTTAAGCTTGCTCCGGATGGCGAAAAATCTGTGGCAACCAAGCTTGCTGGAACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACTAAAGTTGATGTGTTCAGCTACGGGGTGGTCCTGATGGAACTACTGACTGGATTAACAGCGCTTGATGAGAGCCGGCCGGAGGAAAGACGATATCTAGCAGAATGGTTTTGGCGAATCAAATCAAACAAAGAAAAGCTCATGGCTGCCATTGATCCAGCTTTGGAAGCAACTGACGAGGCTTTCGAGAGCATATCCATTGTATCTGAACTCGCTGGACACTGCACTGCAAGGGAGGCACACCACCGGCCAGATATGAGTCATGTAGTGAATGTACTCGTGGCATTGGTTGAGAAATGGAAACCGGTTGATGATGAGTTAGATTACGACTCTGGTATTGACTACAGTAGACCGCTCCCACAAATGCTGAAGATTTGGAAGGAAGCAGAGAGCAATGAATTTAGCTATGGCGCCAGTACTGAAAACAGTAGAGGAAGTAGTATAGCAGCCAAGCCTTCTGGTTTTGCTGATTCTTTTACCTCTGCTGATGCTAGATGA 2898 0.4282 MEGSHIMAVLFFLFFGLIMRMCYGDTDPNDLKVLNSFRKGLENPELLKWPEDGDDPCGPPSWPYVFCSGDRVTQIQAKNLGLRGTLPPNFNQLSELYNLGLQRNNLTGMLPSFSGLSKLEFAFLDYNAFEAIPSDFFNGLTSLRVLSLEENPLNGTTGWSFPLDLEKSVQLTNLSLVNCNLVGPLPDFLGTLPSLTNLRLSGNRLSGKIPETFAQSSIQVLWLNNQEGEGLTGPIDVVSSMIFLRQLWLHGNQFNGRIPHDIGNLTSLQELNLNSNQLVGLIPESLAEMELELLVLNNNMLMGPIPEFKAANVSYNNNFFCQIKPGHECDPQVTALLDVLDNLNYPLFLISDWSGNNPCTGSTESTGPWFGLSCNSNHQVSIINLPRHELNGTLSPSLAKLDSLLEIRLEGNNITGMVPSNFSELKSLRLFDLSDNHLEPPLPNFREDVKVVIVGNPLLTTESGGMSLPPENSHPSPDNLSPPSSSSHKAHDPNMNSSSSQSKLDHSKRFKTVAIVSGITVFVVAVPLVVFLFICSMKKKKASLDAPSSIVVHPRDPSNRDNVVKVTVSDTTTGSLSTKTGTSSLSNISGETQNSHIIEAGNLVISVQVLRKVTNNFSSENELGRGGFGTVYKGELEDGTKIAVKRMEHGVISSKALEEFEAEIAVLSKVRHRHLVSLLGYSIGGNERLLVYEYMPLGALSQHLFHWKNLKLKPLSLSQRLAIALDVARGIEYLHGLACQTFIHRDLKSSNILLGDDFHAKVSDFGLVKLAPDGEKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSYGVVLMELLTGLTALDESRPEERRYLAEWFWRIKSNKEKLMAAIDPALEATDEAFESISIVSELAGHCTAREAHHRPDMSHVVNVLVALVEKWKPVDDELDYDSGIDYSRPLPQMLKIWKEAESNEFSYGASTENSRGSSIAAKPSGFADSFTSADAR 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00691 965 Gene3D Ribonuclease Inhibitor 331 463 IPR032675 -
Aip08g00691 965 MobiDBLite consensus disorder prediction 462 503 - -
Aip08g00691 965 PANTHER OSJNBA0070M12.3 PROTEIN 7 965 - -
Aip08g00691 965 Gene3D Phosphorylase Kinase; domain 1 578 694 - -
Aip08g00691 965 SUPERFAMILY L domain-like 26 309 - -
Aip08g00691 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Aip08g00691 965 CDD STKc_IRAK 623 893 - -
Aip08g00691 965 SUPERFAMILY L domain-like 331 445 - -
Aip08g00691 965 Pfam Leucine rich repeat N-terminal domain 330 375 IPR013210 -
Aip08g00691 965 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Aip08g00691 965 SMART LRR_typ_2 192 215 IPR003591 -
Aip08g00691 965 SMART LRR_typ_2 93 115 IPR003591 -
Aip08g00691 965 SMART LRR_typ_2 140 163 IPR003591 -
Aip08g00691 965 SMART LRR_typ_2 116 139 IPR003591 -
Aip08g00691 965 SMART LRR_typ_2 401 424 IPR003591 -
Aip08g00691 965 SMART LRR_typ_2 265 288 IPR003591 -
Aip08g00691 965 SMART serkin_6 617 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00691 965 PANTHER OSJNBA0070M12.3 PROTEIN 7 965 - -
Aip08g00691 965 SUPERFAMILY Protein kinase-like (PK-like) 592 901 IPR011009 -
Aip08g00691 965 Pfam Protein tyrosine and serine/threonine kinase 620 893 IPR001245 GO:0004672|GO:0006468
Aip08g00691 965 Gene3D Transferase(Phosphotransferase) domain 1 695 911 - -
Aip08g00691 965 MobiDBLite consensus disorder prediction 462 504 - -
Aip08g00691 965 Gene3D Ribonuclease Inhibitor 28 327 IPR032675 -
Aip08g00691 965 ProSitePatterns Protein kinases ATP-binding region signature. 623 645 IPR017441 GO:0005524
Aip08g00691 965 MobiDBLite consensus disorder prediction 936 965 - -
Aip08g00691 965 ProSiteProfiles Protein kinase domain profile. 617 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00691 Aip-Chr8 6484996 6489092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00691 63 897 Receptor kinase-like Gene Family AT5G07180 29.535 1.05e-77 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Aip08g00691 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00691 - - gmx:100785090 1481.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00691 08 6484996 6489092 Aip08g00691 08 6484996 6489092 ECH