Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00683 ATGTCGAAGAAGGAATGCCCCCATCATGACGACGACGATAACCACCAGCTCAACCGCCAAATACTCGCCGGAATCCTCGGATTCATCTTCCTCGTACTCCTCGTGATCTTCCTCATATGGATCATCCTTCGTCCAACCAAGCCACGCTTCATTCTCCAAGACGCCACCGTCTACACCTTCAACTTCTCCACCACCGGCGCCGCCATACCAACCCCGAACACCCTCACCACCACCATGCAAGTAACCCTCACATCCTTCAATCCAAACCAGCGCATAGGCATATACTACACCAAGCTCGACGTCTATGCCTCCTACCGCGGCCAGCAGATCTCCCTCGCCACCCAGCTTCCGCCGTCCTACCAGGGCCATCGTGACGTCACTGTTTGGTCGCCGTTTCTGTACGGTAACGCCGTGCCTGTGTCGCCGTTTCTGTTGGAGCCGTTGCAGCAGGACCAGAATGCTGGTGATGTGCTGGTCAACGTTAAGGTCAACGGAAGGGTTAAGTGGAAGGTGGGGACATGGGTCTCCGGGAGGTACCACGTGTACGCCAACTGCCCGGCATACATCAAGTTCGTCGGCGGCGACCGGGATAATGCCGTCGGAGCTTCGGCTCCGGAGATAAGTCATCCTCTACTGCCATTCATCCGCGCTGCCGTCCTCCTCGACCCTCATCCTCGACGCTGCCTTCCTCCACCTCGGCGCTCATCCACAACGTCGCATTCCTCTCCTTCCAAACTCATCTTGGTTGCCGTCGTCGCCGGTCTCTGCCCGCACTCTCCTCCTCCCGCGTCGGTCTCCTCCCCTTACGTAGCTCTCGCACACCGCGTTTCTCCTCCTGTGCAGCTCCGTCACACTACGCTACTCCCCCTGCGCAGCTCTGTCGTGCCGCCTTTCTCCTCCGATCCACACCACTTCTCAATCGGGCCGCCTCCCTCCTCCACGCCGGAAACACTCATAAGGTATTTGGATGTGGCTGCGTTGATCATTTTTGTTCACTATTTTGCATGA 1008 0.5774 MSKKECPHHDDDDNHQLNRQILAGILGFIFLVLLVIFLIWIILRPTKPRFILQDATVYTFNFSTTGAAIPTPNTLTTTMQVTLTSFNPNQRIGIYYTKLDVYASYRGQQISLATQLPPSYQGHRDVTVWSPFLYGNAVPVSPFLLEPLQQDQNAGDVLVNVKVNGRVKWKVGTWVSGRYHVYANCPAYIKFVGGDRDNAVGASAPEISHPLLPFIRAAVLLDPHPRRCLPPPRRSSTTSHSSPSKLILVAVVAGLCPHSPPPASVSSPYVALAHRVSPPVQLRHTTLLPLRSSVVPPFSSDPHHFSIGPPPSSTPETLIRYLDVAALIIFVHYFA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00683 335 PANTHER OS05G0367900 PROTEIN 12 213 IPR044839 GO:0098542
Aip08g00683 335 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 12 213 - -
Aip08g00683 335 Pfam Late embryogenesis abundant protein 82 181 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00683 Aip-Chr8 6420345 6422554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00683 22 185 EF-hand Containing Proteins AT5G21130 22.156 5.62e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00683 - - pvu:PHAVU_005G120900g 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00683 08 6420345 6422554 Aip08g00683 08 6420345 6422554 ECH
Aip08g00683 08 6420345 6422554 Aip03g01440 03 15197230 15198190 PCT