Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00663 ATGGAGGATCCACCAACTGGTTTTCGGTTCTATCCTACAGAAGAAGAGCTAGTTGCTTTCTACCTAAACACCCAGCTTCAACTACAAGGCCACGCCAATAACATCAACAGGGTCATTCCAGTGGTTGACATCAATGGCGTTGAGCCCTGGACTCTTCCATCACTGGCGGGAGAGCTGTGCAGGGAAGAGAAGGAACAATGGTTCTTCTTTGTGCCTCGCCAAGAGAGGGAAGCCAGAGGGGGGAGGATCAACAGAACCACTGCTTCTGGAAAAGCTCCCACCGGTCGCAAAACTAAATGGAAGATGCATGAATACCGCGCCATCGTTCAAGCCCCTAACCAATCTCCCACGGCTATTCCTCAGTTGAGGCACGAATTCAGCTTGTGTCGCGTGTACGTGATATCCGGAAGTTTCAGAGCATTTGATCGACGGCCACGGGAGGTGGTGGTGCCAAGAGTTCTTCATCATGGTTCTTCTACAACAAGTGCTCAGCAGCATCAAGGAGAATCATCAGCAAGGGTGCAGGCTAATAATAATAATAACGGGTCGAGCTCGTCGGAAACTTCCCTTTCATCAGGTGGTCCTGATTTGCCACCAGATACTGGAGGAGGAGGGTCAAGTAGCAATTGGAATAGTAGTGAGGTTCAAGTTCAAGCTCAAGTTCAAGAACCGCTATGGGAATGGGAACAACTCGATTGGCTATAA 705 0.495 MEDPPTGFRFYPTEEELVAFYLNTQLQLQGHANNINRVIPVVDINGVEPWTLPSLAGELCREEKEQWFFFVPRQEREARGGRINRTTASGKAPTGRKTKWKMHEYRAIVQAPNQSPTAIPQLRHEFSLCRVYVISGSFRAFDRRPREVVVPRVLHHGSSTTSAQQHQGESSARVQANNNNNGSSSSETSLSSGGPDLPPDTGGGGSSSNWNSSEVQVQAQVQEPLWEWEQLDWL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00663 234 MobiDBLite consensus disorder prediction 155 223 - -
Aip08g00663 234 MobiDBLite consensus disorder prediction 202 220 - -
Aip08g00663 234 SUPERFAMILY NAC domain 4 132 IPR036093 GO:0003677|GO:0006355
Aip08g00663 234 MobiDBLite consensus disorder prediction 155 195 - -
Aip08g00663 234 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 90 - -
Aip08g00663 234 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 90 - -
Aip08g00663 234 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 90 233 - -
Aip08g00663 234 ProSiteProfiles NAC domain profile. 4 156 IPR003441 GO:0003677|GO:0006355
Aip08g00663 234 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 90 233 - -
Aip08g00663 234 Pfam No apical meristem (NAM) protein 5 90 IPR003441 GO:0003677|GO:0006355
Aip08g00663 234 Gene3D NAC domain 13 89 IPR036093 GO:0003677|GO:0006355
Aip08g00663 234 Gene3D NAC domain 90 137 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00663 Aip-Chr8 6236524 6237835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00663 1 233 NAC Transcription Factor Family AT5G22380 45.660 1.17e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip08g00663 NAM 2.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00663 - - gmx:100780264 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00663 08 6236524 6237835 Aip08g00663 08 6236524 6237835 ECH