Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00659 ATGGTATTAGCCTACACCAACGCCGCCTCAAGGAGTGGCATACTGCCGCCGTCCGTCCGTCCGTCCGTCTATCTAGCTTCCCTCGTGCTCCAAGTCTTCAACCCCCGTTCGCTGTCACCGATCGCAGCTGCTTCCTCGAGCTCGGCGTCCGTCGTCTTCGTTCGCGTTCTTCGCCGTTCAAGTTTGCTCGGCGTTCACCGTTCGCGTTCACTCGCCGTTCACCGTTCGCGTTCACTCGCCGTTCACCGTTCGGGTTCGCGTTCGTCTGGAAGTCACGTTGCCCTGCTTCAAACTCTGCAACCAACCCGCGCGCTCCACCTAGCCGTCGAACTGCTCTCTTTTGTTGCCGCCATCCCCAACAACCGTCGCAAAATGACTCGCCAAGGAGCTTATAAAGAAAGCGATGACATGCTCATTGATGAACCAAAACTGCCTCAGCAAGGCCAAATCGCGGCCCTTCCTAATGAGTTCAACCCCAGTTATCTGAAAATATATTACAGTAAGCTGTTTCCTCATGCTGATTTATATAGATGGATGTCATACGGCAACGATGGGAAGCATCCTGCTTGTGATTCATCTTACTTGGGACGAAGGGAATTCTCGTACACCCTAGATAACGATATATTTGTGCGCTACAATACCTTCAATAGTGCCACCGAACTTGAAAACTCCATCAAAGACAAGTGCCCGTTAAAGATAGATATTGGACCCATCTACAACCTCAACCCTGCACATAGGAATGCTTATGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGACTGTAGCTGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGTCTAATGAGCAGAGAGCAGCAGTTGCGGACTATTTTCGTGTCTACAAGGGAAATGAAAATAACTATAAGAAGGTTTCCTTGATGGGTCAAGTTCTGCATCCCTTTCTGGCGAGATCATATACTGAAGTTCTCAAGGAATATTTTGAGACAAAACTGCTTACAAGTCAAAATTTACTTTCTAGCGAGGAGAGATATGAAAAGATCCTAGAGATGATTCCTGATCAATCTATTGCTTCTGAACTTCGAGGAAAGTGGCAAGAAAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATTAATATTGTTCGATGGGAGCAGCTTAAACAGTTGCTGCAAAAACATAAGGCACAAGGGGTGCGTAGGTGTGTTGAAGAGATTGTGTTCACCTATACATATCCTAGGCTTGATATGGAGGTTTCTAAACATATGAACCATTTGCTCAAAGCACCCTTCTGTGTGCACCCAAAAACAGGCCGTGTTTGTGTCCCCATCAACCCAAATAATTGTGAAGAATTTGATCCCACGACGGTGCCAACCCTTATCCAGCTTTTGGAAGAGCTGAATAGGGAGGGCTTGAGGTCTGATGTTGAAGGAGAATGGAATAAAACTTCACTTGCAAATGCCATCAAGCTCTTTAGGTCATCCTTCCTTCAGCCATTACTGAAAATTTGCAAGGAGGAAATGGAAAGCTCCTATAATGCGAAACTACAGCAGTCGAAGAATCTCCTTAGTTGGTAG 1734 0.4579 MVLAYTNAASRSGILPPSVRPSVYLASLVLQVFNPRSLSPIAAASSSSASVVFVRVLRRSSLLGVHRSRSLAVHRSRSLAVHRSGSRSSGSHVALLQTLQPTRALHLAVELLSFVAAIPNNRRKMTRQGAYKESDDMLIDEPKLPQQGQIAALPNEFNPSYLKIYYSKLFPHADLYRWMSYGNDGKHPACDSSYLGRREFSYTLDNDIFVRYNTFNSATELENSIKDKCPLKIDIGPIYNLNPAHRNAYAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMTVAVKVIDTSLRDDFGFRHILWVYSGRRGVHCWVCDRKARRLSNEQRAAVADYFRVYKGNENNYKKVSLMGQVLHPFLARSYTEVLKEYFETKLLTSQNLLSSEERYEKILEMIPDQSIASELRGKWQESRRSSSAKEDINIVRWEQLKQLLQKHKAQGVRRCVEEIVFTYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPINPNNCEEFDPTTVPTLIQLLEELNREGLRSDVEGEWNKTSLANAIKLFRSSFLQPLLKICKEEMESSYNAKLQQSKNLLSW 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00659 577 Gene3D DNA primase, PRIM domain 148 558 - -
Aip08g00659 577 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 163 518 IPR014052 GO:0003896|GO:0006269
Aip08g00659 577 CDD AE_Prim_S 171 506 IPR014052 GO:0003896|GO:0006269
Aip08g00659 577 PANTHER DNA PRIMASE SMALL SUBUNIT 168 577 IPR014052 GO:0003896|GO:0006269
Aip08g00659 577 Pfam DNA primase small subunit 264 497 IPR002755 GO:0003896|GO:0006269
Aip08g00659 577 PANTHER DNA PRIMASE 168 577 - -
Aip08g00659 577 SUPERFAMILY Prim-pol domain 157 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00659 Aip-Chr8 6172918 6180862 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00659 125 577 Core DNA Replication Machinery Family AT5G41880 63.319 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00659 K02684 - csin:114313298 717.998