LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip08g00647	ATGAAACTCATGGGGATTCCAGGTCTTACTTTATATCATCTGAAGAGCCATCTGCAGAAGTACAGATTGAGCAAGAATTTGCATGGACAAACTAACACTGTAACACACAAAATCACAACAAATGCGGGGGCAACAACAAGTGAAAGATCACTTTCAGAACCCAGTGGAACTCATATGAACAAGTTAAGCCTTGGCCCACAGGCTAACAAAGATTTACATATAAGTGAGGCACTGCAGATGCAAATTGAAGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAAAGACACTTGCAGCTTCGGATAGAGGCACAAGGAAAATACCTGCAGTCTGTGCTAGAGAAAGCTCAAGAGACACTTGGTAGACAAAATTTGGGAATGGTAGGACTTGAAGCTGCCAAAGTTCAACTATCAGAGCTGGTGTCCAAGGTCTCCTCCCAGTGCTTGAACTCGGCATTTTCAGAGCTGAAGGAACTACAAGGATTTTGCCCCCAGCAACCACAAACCAACCAGCCAAATGATTGCTCAATAGATAGTTGCCTCACATCTTGTGAAGGGTCACAGAAGGAGCAAGAGATACAGAATGGTGGGATAGGTTTAAGGCACTTGAATGGCCATGGCCATGCATTCATGGAAAGAAAGGGAGGCACAGAAGCTCCTAAATGGAGTAATGAAGTGAAAAACAACACATTTCTAGCTCCATTAGGCAAGAATTCAGAAAGAAGTAGCTATGGTGCAGAGAGAAGCAGTGGAAACTTGTCTATGAGCATTGGACTTGAAAGGGAAACTGAGAATGGAAGCAGCATGTATACTGAGAGTCACACTCACACAGATGGTGAGTTCTGGCACAGAAACAGCAATAGGACAGAACCAAAGAATGAAGCAATGGATGGAGGAAGAGGTTCCCATGATTATAGGTTGCCTCCTCCATACTTTTCAGCAGCAAGATTGGACTTAAACTCACATGGAGATAACAATGAAGCTGCAACAACAACAACAAGCTGTAAACAACTGGATTTGAACAGATTCAGTTGGAGCTGA	1041	0.4332	MKLMGIPGLTLYHLKSHLQKYRLSKNLHGQTNTVTHKITTNAGATTSERSLSEPSGTHMNKLSLGPQANKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGMVGLEAAKVQLSELVSKVSSQCLNSAFSELKELQGFCPQQPQTNQPNDCSIDSCLTSCEGSQKEQEIQNGGIGLRHLNGHGHAFMERKGGTEAPKWSNEVKNNTFLAPLGKNSERSSYGAERSSGNLSMSIGLERETENGSSMYTESHTHTDGEFWHRNSNRTEPKNEAMDGGRGSHDYRLPPPYFSAARLDLNSHGDNNEAATTTTSCKQLDLNRFSWS	346

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip08g00647	346	Coils	Coil	75	95	-	-
	Aip08g00647	346	MobiDBLite	consensus disorder prediction	276	301	-	-
	Aip08g00647	346	MobiDBLite	consensus disorder prediction	32	64	-	-
	Aip08g00647	346	MobiDBLite	consensus disorder prediction	32	65	-	-
	Aip08g00647	346	Pfam	MYB-CC type transfactor, LHEQLE motif	73	119	IPR025756	-
	Aip08g00647	346	PANTHER	MYB FAMILY TRANSCRIPTION FACTOR PHL11	1	346	IPR044848	GO:0003700
	Aip08g00647	346	Gene3D	-	1	26	-	-
	Aip08g00647	346	MobiDBLite	consensus disorder prediction	269	304	-	-
	Aip08g00647	346	PANTHER	MYB-RELATED PROTEIN 2	1	346	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip08g00647	Aip-Chr8	6077298	6079940	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip08g00647	1	345	G2-like Transcription Factor Family	AT3G04030	50.992	1.97e-96	287

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip08g00647	-		-	gmx:100810396	483.796

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