Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00646 ATGGGGAGCCAGAGAATAATAGGAGGAGGACTTGGTTTATCTGAGGCAGGGCCTTCAACTCACCACCATCACCATGTCCCTTCTTATGGTGTTCTTCATGGAATTAATTCTGCTAATCCATCAACCTTAATTAATGAAGGACATGCTTTTAACTTTGGAGAGTTGGAAGAGGCAATAGTGCTGCAAGGAGTAAAGGCAAGAAATGATGAAGGCAAAGCACCTTTATTCACAACAGCACCCAGACCTGCAGCTACACTAGAAATGTTCCCTTCATGGCCAATCAGATTTCACCAAACCTCAAGGGGAGGTTCAAAATCAGGAGGAGAAAGCACTGATTCAGCACTTTCAACAAAAACTGAGCCACCCTTGGAAGCAGAATCTCCAATGAGTAAAAAGGCAACAACACCTTCTTCTTTAGATCATCAGCACCACCTTCAACATGATCATCATGATGCCTCAAGAATAGTAGGCCCTTCTTCATCATCACAGAATCAATCACAAGCCAAATCACCTCATGAAAAGAGGAAGGGAGCTGGTTCCACATCAGAGAAACCACTTGATGCAAAGACATTGAGACGTTTGGCTCAAAACAGAGAGGCAGCAAGAAAAAGCCGTCTAAGGAAAAAGGCTTATGTGCAGCAATTAGAGTCAAGTAGATTAAAGCTTACACAACTTGAACAAGACCTTCAAAGGGCTCGTTCTCAGGGACTATTCATGGATTGTGGTGGTGTTGGAGGCAATCTAAGCTCTGGAGGTGCGATGTTTGACATGGAATACGGAAGGTGGTTGGAGGAAGAGCAGCGGCTGATGGGGGAGCTCCGGAACGGGGTGCAGGCGGCGGTGTCGGAGGGGGAAATGAGAGGGATAGTGGATGGATATTTGTCACATTACGATGAGCTGTTCAGGCTGAAGAGTGTCGCAGCTAAATCAGATGTTTTCCATCTCATCAATGGCATGTGGACCTCCCAAGCTGAACGCTGCTTCCTCTGGATCGGTGGTTTCAAGCCCTCCGACCTCATCACGATGTTGATACAACAGTTGGAGCCACTGGCGGAGCAACAGATAATGGGAATGTATGGCCTGCGCCATTCCTCACAGCAAGCGGAGGACGCTCTCTCTCAAGGCCTTGACCAGCTCCAGCAGTCTCTCGTCGACACCATCGCCGGCGGCCCCATTGTCGACGGCGTCCAACAGATGGTTGTTGCCATGGGCAAGCTTGCCAATCTTGAAGGCTTTGTTCGCCAGGCTGATAATTTGAGACAGCAAACACTTCATCAATTATGTCGATTACTAACAGTTCGTCAAGCAGCACGGTGTTTTATTGTCATTGGAGAATATTATGGACGCCTTCGCGCCCTTAGTTCTCTTTGGGCATCAAGGCCACGAGAGACGTTGATGAGCGATGATAACTCATGCCAAACAACCACTGACTTGCAAATGGTGCATCCTTCTCATCATCAGAATCACTTCCCCAGCTTCTAA 1482 0.4764 MGSQRIIGGGLGLSEAGPSTHHHHHVPSYGVLHGINSANPSTLINEGHAFNFGELEEAIVLQGVKARNDEGKAPLFTTAPRPAATLEMFPSWPIRFHQTSRGGSKSGGESTDSALSTKTEPPLEAESPMSKKATTPSSLDHQHHLQHDHHDASRIVGPSSSSQNQSQAKSPHEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQDLQRARSQGLFMDCGGVGGNLSSGGAMFDMEYGRWLEEEQRLMGELRNGVQAAVSEGEMRGIVDGYLSHYDELFRLKSVAAKSDVFHLINGMWTSQAERCFLWIGGFKPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEDALSQGLDQLQQSLVDTIAGGPIVDGVQQMVVAMGKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFIVIGEYYGRLRALSSLWASRPRETLMSDDNSCQTTTDLQMVHPSHHQNHFPSF 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00646 493 Gene3D - 188 237 - -
Aip08g00646 493 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 231 IPR004827 GO:0003700|GO:0006355
Aip08g00646 493 Pfam bZIP transcription factor 188 230 IPR004827 GO:0003700|GO:0006355
Aip08g00646 493 MobiDBLite consensus disorder prediction 137 154 - -
Aip08g00646 493 PANTHER TRANSCRIPTION FACTOR TGA9 73 470 - -
Aip08g00646 493 PANTHER TRANSCRIPTION FACTOR TGA9 73 470 - -
Aip08g00646 493 MobiDBLite consensus disorder prediction 169 191 - -
Aip08g00646 493 MobiDBLite consensus disorder prediction 88 191 - -
Aip08g00646 493 Pfam Seed dormancy control 270 344 IPR025422 GO:0006351|GO:0043565
Aip08g00646 493 SUPERFAMILY Leucine zipper domain 189 232 IPR046347 GO:0003700|GO:0006355
Aip08g00646 493 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Aip08g00646 493 ProSiteProfiles DOG1 domain profile. 252 460 IPR025422 GO:0006351|GO:0043565
Aip08g00646 493 MobiDBLite consensus disorder prediction 97 120 - -
Aip08g00646 493 MobiDBLite consensus disorder prediction 1 27 - -
Aip08g00646 493 CDD bZIP_HBP1b-like 189 239 - -
Aip08g00646 493 SMART brlzneu 185 250 IPR004827 GO:0003700|GO:0006355
Aip08g00646 493 Coils Coil 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00646 Aip-Chr8 6057363 6064993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00646 139 493 bZIP Transcription Factor Family AT1G08320 67.313 7.51e-177 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip08g00646 DOG1 2.3e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00646 K14431 - gmx:100775461 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00646 08 6057363 6064993 Aip08g00646 08 6057363 6064993 ECH
Aip08g00646 08 6057363 6064993 Aip03g00222 03 2236821 2240167 PCT