Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00645 ATGAAAAGATTCGGACATCACCTTAAACTATTGTTCAGTGATAAGAAACCATCACAATCTCAGACAAAACAACTCTGCAGAGGTTTCTGTCAGGGGACTAAGGTTGTTTCTCCAAACCAAGATGATTTTGCTATGATTTCACCAAGAATTAAACTCAGAGATGGGAGGCACCTGGCTTATCTTGAGAGAGGGGTTTCTAAGGATGTGGCAAAGTACAAGATCATCATTGTCCATGGTTTTGGAAGCTCCAAAGAGATGAACTTTCTCGCACCCCAAGAACTAATAGATGAACTAGGCATATATCTGCTGCAATATGACCGAGCTGGGTATGGAGAAAGTGATCCAAATCCCAAACGCTCGCTCAAAAGTGAAGCACTTGACATTCAAGAACTTGCTGATCAGTTAGAGTTAGGGCCACAGTTCTATGTCATTGGAGTCTCAATGGGTTCATATGCTACATGGAGTTGCCTTCAGTACTTACCCCACAGGCTTGCAGGGTTGGCACTGATAGCACCAGTGATCAATTACAAGTGGCCTTCACTTCCCAAGAGTCTAATAAGAGAGGATTATAGAAGGAAACTTGTGCAATGGGCTAGGTGGCTTGCAAGCTATTGTCCTAAGCTATTGCATTGGTGGGTAACTCAAAAGTGGCTGCCTTCAGCTGCTGTCATTGAAAAGAACCCAGCTTTCTTCAACAAGAGTGATATTGATATTCTAAAAACACTCCCTGGCTTCCCAATGCTTACCAAGGACAGCTTAAGGGAACAAGTTGTATTTGACACACTTAGGCATGATTGGAGGGTTGCTTTTGGAAAATGGGAATTTGACCCTTTAAAGCTCACGAATCCATTCCCTCACAGCACAAGGGGTTTGATTATTGGCCTGTTGATGCAACAAACAACAATGGCAGTTTCTGGAACAAAAACCATTTCTCATGAAACCCTTACACAAGAATTGTTACAATCAGAAGCAGCAGAACCAGTGAGCAAGCAGAACTCAATCCTCTCACTCACACTTGATGAGATCCAATGCAAGAGTGGTAAGAGCTTTGGATCCATGAGCATGGATGAATTCTTAGCCAGCATTTGGAGCTCTGAGGACAACAACAACAACAACAACAACAACACAAATCAAACCCTTCATGATGAACAAGCTTCTCAACACATCATGAAAAGTGCTGGAACAAAAACAGAACAACAACAACAAGGTTCATTCTGTGTCATCCCATCTCCAATTTGCAAGAAAACTGTGGAGGAAGTTTGGTCTGAGATCCACAAAGACCAAGAACCACAACAAAGGGATGAATCTAACAACATTGGAATGAATGAGGCACTTAGAAAGCAACAAACACTTGGGGAAATGACATTGGAGGATTTTCTAATTAAAGCTGGTGTTGTACAAGAATCAAAATTAACATCAAAATCAAGAGTTGCTACTACAACAATAATGCCTTTAGTATTTCAGAATCATGTTAGCAACATTGCAAGTAGTAATAGACCAATGGATCCAAGTTATGCAGTGAGGTCTCCTATGGGAGTAGGATTCCCTAGCCAACAAAATCTTGGGAACCATGGGACTAATAACAATGGACTTGGAACATATCCAATTTTGTTACAGAATAATAATAGCTCCACAAGGCTTCTGGACTCGAGCGTGGGCAGCAGCAGGAAGAGGGTAATTGATGGTCCTCCAGAAGTGGTGGTAGAGCGAAGGCAGCGCAGAATGTTGAAGAATCGAGAATCTGCTGCAAGATCACGGGCGAGAAGACAGGCATATACGGTTGAGCTAGAAGCAGAGCTGAATGTGCTAAAGGAAGAGAATGAGAATCTAAAACAAATTCTGGATGAAGCAGAGCTCAAGAGGAAACAAGAGATTTCACAGAGGAAGCACACAACAAAGGCACAAAAGAGGACAGAAAAATTGAGGGAAATAAGAAGGACTATTAGTGCAGCTTGGTGA 1959 0.4206 MKRFGHHLKLLFSDKKPSQSQTKQLCRGFCQGTKVVSPNQDDFAMISPRIKLRDGRHLAYLERGVSKDVAKYKIIIVHGFGSSKEMNFLAPQELIDELGIYLLQYDRAGYGESDPNPKRSLKSEALDIQELADQLELGPQFYVIGVSMGSYATWSCLQYLPHRLAGLALIAPVINYKWPSLPKSLIREDYRRKLVQWARWLASYCPKLLHWWVTQKWLPSAAVIEKNPAFFNKSDIDILKTLPGFPMLTKDSLREQVVFDTLRHDWRVAFGKWEFDPLKLTNPFPHSTRGLIIGLLMQQTTMAVSGTKTISHETLTQELLQSEAAEPVSKQNSILSLTLDEIQCKSGKSFGSMSMDEFLASIWSSEDNNNNNNNNTNQTLHDEQASQHIMKSAGTKTEQQQQGSFCVIPSPICKKTVEEVWSEIHKDQEPQQRDESNNIGMNEALRKQQTLGEMTLEDFLIKAGVVQESKLTSKSRVATTTIMPLVFQNHVSNIASSNRPMDPSYAVRSPMGVGFPSQQNLGNHGTNNNGLGTYPILLQNNNSSTRLLDSSVGSSRKRVIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNVLKEENENLKQILDEAELKRKQEISQRKHTTKAQKRTEKLREIRRTISAAW 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00645 652 Gene3D - 568 628 - -
Aip08g00645 652 Gene3D alpha/beta hydrolase 44 284 IPR029058 -
Aip08g00645 652 Pfam bZIP transcription factor 570 618 IPR004827 GO:0003700|GO:0006355
Aip08g00645 652 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 568 616 IPR004827 GO:0003700|GO:0006355
Aip08g00645 652 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 1 460 - -
Aip08g00645 652 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 1 460 - -
Aip08g00645 652 Coils Coil 593 627 - -
Aip08g00645 652 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 573 588 IPR004827 GO:0003700|GO:0006355
Aip08g00645 652 SUPERFAMILY alpha/beta-Hydrolases 43 220 IPR029058 -
Aip08g00645 652 SUPERFAMILY Leucine zipper domain 570 615 IPR046347 GO:0003700|GO:0006355
Aip08g00645 652 Pfam Serine aminopeptidase, S33 71 210 IPR022742 -
Aip08g00645 652 SMART brlzneu 566 630 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00645 Aip-Chr8 6049076 6053786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00645 311 652 bZIP Transcription Factor Family AT3G44460 45.938 1.22e-69 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip08g00645 Hydrolase_4 4e-10 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00645 - - aip:107613750 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00645 08 6049076 6053786 Aip08g00645 08 6049076 6053786 ECH
Aip06g02012 06 86614048 86622974 Aip08g00645 08 6049076 6053786 ECH
Aip02g03228 02 109029989 109033178 Aip08g00645 08 6049076 6053786 ECH