Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00635 ATGACCTCGAAGCACGACGGCGGCTCCATGGACGAGATGGCAGTGATGGCAGCTCCTCCTTTTGACCTCCATCGCATCTCTCTCTCGACGCCTCTCCTTCATCCCTGTTCAACCGGGACCAAGCCGAACTCCACGGAACGGCGACGACGGGCGGGCAAGGCGCGACGACTCCCTTCCCCTCCTCTTCTCTTCTTCTTCCCGTTTCCCCTCTGCTTCTCGTTTCTTTCCTTTTCTCTGAACGAGCAGAGGCACGAAACACACCTCCGCGCACGAATCCTTGCCGCCGTGCTCGTCAGTACCAGTTGCATTGTGCTTCCCCTTGCTGGTGGGTCTATCACCAATCTGCTCCCTGCTTCCTCTAGTCCCATCATTAGCCCTGACCCCAAAACGGTGCTCCCATGCTTCCTCTCTTCAGCCAAATCTACTCTATCCGTGGTTCAAATTTGCTGCAGCTGCACGAGTTTCTTGCCACAGTCGCCTTCGGCCTCCGTCACTGCTAGCTCCATTGCCACCACCACCATCTTAGGTTCTTCTCCTTCTTCCTTCTTTTTCTTTACTAGGGGGCTGCGAATACTTTCTCTTGTTCTCGGATCTGAAATTACTGATGCATCTGTTGCTGCTATTGCTTCTAGCTACCCTAATTTAGAACTGCTTGATTTCAGTGGATCTGGCATAAGTGACAGTGGCATAGGAATAATTTGCAATGTGTTTCCTGAAACATTATCAAGACTCCTTCTTGCCCTTTGTCCTAATGTGACTTCAACTGTTACTGACATAGACACTAGTGACATCCATGCCCTTGAAGAGTTACATAGAAGTCTTGAGAAGAGAGATATTGAGCTTGTTCTGGCAAATTCTGGCCCAGTTGTTGAATCTCTATCTAAGGGAATTGAATACATTTGGGTTCAGAGAAGAAAACCCTCAGCTCAAACTCAGCTCACACTCAGAGAAGAAAACCCTCAGCTCGTCATCACCCTTTCACCTTTCAGAGAAGAAAACCCTCCAAGAGTCACCATTCACCGCGCGAAGAAAACCCTTTCAGAAAACCCTTCTACATCCCGCGAATCGAAAACCCTCACCATCGCGAAGATCGAACCCCAGTCACCACTCACCGCCACACACCACTCACCACTAACCACTGACCGTCGCTCCTCTTCGCCCTCCTGCACTGATCGTTGCGCGCCGCCCACACCGTCGTCGATCTCTGCGCTTCTCGTCGTCCTCTCTGTGCTCACGTCGTCGATTAGAAAAAGTTTATTTGTCCCATCATGGTTTGGATTTTTGGTTGCAATTCTAGCTGCAGTAAAATTTGCAGTTGATGCTGCTGTAATTGTTGTAAAGGGCTATAAAATTGTAACATCAGTGCCCAAAGCCGGAGATGTTTGCCGGACTGCAGTTCACCAGCTCTCCGGTCACCAGGAAAGGCGAAGGGATGAGTTTACAAGAATGAGATTGCAGCTTAGAATTCCTGCAATTGAAAGGGTTTTTTTTACATGTGAAGATTCTGTACAGTATTTTGAAAATGGATTTCATATTCTTAAAGTTCTTTCCAACTGCTGA 1560 0.4872 MTSKHDGGSMDEMAVMAAPPFDLHRISLSTPLLHPCSTGTKPNSTERRRRAGKARRLPSPPLLFFFPFPLCFSFLSFSLNEQRHETHLRARILAAVLVSTSCIVLPLAGGSITNLLPASSSPIISPDPKTVLPCFLSSAKSTLSVVQICCSCTSFLPQSPSASVTASSIATTTILGSSPSSFFFFTRGLRILSLVLGSEITDASVAAIASSYPNLELLDFSGSGISDSGIGIICNVFPETLSRLLLALCPNVTSTVTDIDTSDIHALEELHRSLEKRDIELVLANSGPVVESLSKGIEYIWVQRRKPSAQTQLTLREENPQLVITLSPFREENPPRVTIHRAKKTLSENPSTSRESKTLTIAKIEPQSPLTATHHSPLTTDRRSSSPSCTDRCAPPTPSSISALLVVLSVLTSSIRKSLFVPSWFGFLVAILAAVKFAVDAAVIVVKGYKIVTSVPKAGDVCRTAVHQLSGHQERRRDEFTRMRLQLRIPAIERVFFTCEDSVQYFENGFHILKVLSNC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00635 519 SUPERFAMILY RNI-like 173 270 - -
Aip08g00635 519 MobiDBLite consensus disorder prediction 351 394 - -
Aip08g00635 519 Gene3D STAS domain 252 297 IPR036513 -
Aip08g00635 519 MobiDBLite consensus disorder prediction 35 54 - -
Aip08g00635 519 Gene3D Ribonuclease Inhibitor 185 251 IPR032675 -
Aip08g00635 519 MobiDBLite consensus disorder prediction 343 394 - -
Aip08g00635 519 Pfam STAS domain 254 291 IPR002645 -
Aip08g00635 519 PANTHER F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1 187 265 - -
Aip08g00635 519 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 187 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00635 Aip-Chr8 5830246 5838882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00635 254 288 Inorganic Solute Cotransporters AT1G22150 77.143 6.70e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00635 - - adu:107473464 115.546