Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00627 ATGGACCCACCGCCACCACCAGCACCGCCGCCGTGGCAGGACGATCTCGCCGACGACCTCCAGTCACTCAGCTTCGCCTCCACGGCCACCACCACAACCACTGCCGACATCAAGCGCAGCACAAGCTTCGGCTCCGAAACCACCACACTCACGGCCTCCACCTCCGCCCGCATCCCTCTCCCTCCGACAAAGCCCCACGCCCCTTCCTCCGACCCCCGCTGGTCCGCAATCCACCGGATCCGATCCTCTGACGACGACTCCGCCTCCTCCGGCGGTCGCATCCTCCTCCCGTCCGACCTCGTCTTCTCCCGGCGCCTCGGCTCCGGCGACATCAGCTCCGTGTACCTGGCAGAGCTGAAGCCCTCCTCCGACGTAACGTTCGCGGCGAAGGTGATGGACAAGAAGGAGCTAGCTAGCAGGAGCAAGGAAGGGAGAGCGAGGACAGAGAGGGAAATTCTGGAGTTACTGGACCATCCTTTTTTGCCGACGCTGTACGGCGCCATCGAAGCACCTAAATGGCTGTGCCTCCTCACAGAGTTCTGCCCCGGCGGCGACCTCCACGTTCTCCGGCAGCGCCAGGCAAACAAACGCTTCAACGAAGGCGCCGTCAGGTTCTACGCCTCAGAGGTGTTGGTGGCACTTGAATACCTTCACATGTTGGGGATAGTCTACCGTGATCTCAAGCCAGAGAACGTGTTGGTTCGATCTGACGGCCACATCATGCTCACTGACTTTGACCTCTCCTTAAAATGTGATGACTCCACAGCAACGGCTCAGATCATCTCTGATCAAAAGAACTCTCCTCATATATTCCTACAAAAGGATCTCCACACTGAATCCTCCCAATTCACATCGTCCTCATGCATACTACCAAACTGTATAGTCCCCGCGGTGTCATGTTTTCACCCAAAGCGCAAGCGAAAGAAGAAGAAGCAAGGCCATCGTGGTGGGCCCGAGTTCGTTGCCGAGCCCATCGACGTCCGGTCCATGTCATTCGTTGGGACCCACGAGTACCTGGCCCCGGAGATTGTGTCCGGTGAGGGACACGGTAGTGCCGTCGACTGGTGGACCTTAGGGATATTTATATTTGAATTGTTTTATGGTGTGACACCCTTTAGAGGCATGGACAATGAGCTAACCCTAGCAAACATCGTGGCTCGAGCATTGGAGTTCCCAAAGGAACCCAGCGTGCCAGCCACGGCAAAGGACCTTATCTCACAGCTATTGGTTAAGGACCCCGGAAGGAGGCTTGGGTCAATAATGGGGGCTTCCCCTATCAAGAACCACCCATTTTTTCAAGGTGTGAATTGGGCATTGCTAAGGTGCACAACCCCACCCTTTGTACCCCCACCTTTTACTAAAGAAGCTGTATCCGATGAGAGTTGTCCCGAGACTCCCATTGATTATTATTAA 1413 0.5612 MDPPPPPAPPPWQDDLADDLQSLSFASTATTTTTADIKRSTSFGSETTTLTASTSARIPLPPTKPHAPSSDPRWSAIHRIRSSDDDSASSGGRILLPSDLVFSRRLGSGDISSVYLAELKPSSDVTFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYGAIEAPKWLCLLTEFCPGGDLHVLRQRQANKRFNEGAVRFYASEVLVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSTATAQIISDQKNSPHIFLQKDLHTESSQFTSSSCILPNCIVPAVSCFHPKRKRKKKKQGHRGGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGMDNELTLANIVARALEFPKEPSVPATAKDLISQLLVKDPGRRLGSIMGASPIKNHPFFQGVNWALLRCTTPPFVPPPFTKEAVSDESCPETPIDYY 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00627 470 MobiDBLite consensus disorder prediction 40 73 - -
Aip08g00627 470 Gene3D Phosphorylase Kinase; domain 1 100 184 - -
Aip08g00627 470 MobiDBLite consensus disorder prediction 40 58 - -
Aip08g00627 470 ProSiteProfiles Protein kinase domain profile. 100 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00627 470 PANTHER FLIPPASE KINASE 1-RELATED 10 470 - -
Aip08g00627 470 Pfam Protein kinase domain 103 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00627 470 Pfam Protein kinase domain 329 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00627 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Aip08g00627 470 Gene3D Transferase(Phosphotransferase) domain 1 185 291 - -
Aip08g00627 470 Gene3D Transferase(Phosphotransferase) domain 1 328 450 - -
Aip08g00627 470 SUPERFAMILY Protein kinase-like (PK-like) 93 458 IPR011009 -
Aip08g00627 470 SMART serkin_6 100 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00627 470 PANTHER OS11G0150700 PROTEIN 10 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00627 Aip-Chr8 5699021 5703818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00627 11 470 AGC Kinase Gene Family AT3G44610 66.525 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Aip08g00627 Pkinase 4.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00627 K08286 - gmx:100792738 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00627 08 5699021 5703818 Aip08g00627 08 5699021 5703818 ECH