Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00619 ATGTTTTCATCATCACTCTCTCTCTCTCATGGAGTCATGGTATATATATATATCCCTCTCTTCAACACCCTTGCATGCATCAACCAAGTATCCGCCATTGTCATGGAGTTTGAGAATAACGAAGAATCACTGTATTACTATTCTTCTTCTTCATCACTATCTTCTTCTACTTCATCTCAAACCCAACGCTCGGCCATCAGCCCACCGCCATCGTCATCGTCGCCATCACGCAGTCAGAAGAGGAGATCGGGGAGGAAGAAGTTCCGAGAGATGAGACACCCGGTGTACAGGGGTGTCCGGCGGAGGAACGGCAACAAGTGGGTATGCGAAGTGAGAGAACCAATCAAGAAATCAAGAATATGGCTCGGAACTTACGCTACCCCTGAAATGGCCGCTAGGGCACACGACGCCGCAGTTCTGGCACTTAGAGGCACCTCAGCCACCTTCAATTTCCCTCTCTCCGTCCCCCTTCTTCCCCTTGCGGAGTCATCTTCACCTCAACATATTCGAGAAGCTGCTTCCAAAGCCGCACAACAAACTAGTAATAATGATATTACTAACCCTCCTGTTTCTTCTTCAAATATGAATCTTTGTGTTGGTGTTGATGATGGTGGTGGTAGTGGTGGAGTGGGGTCGATTTCATCGACGACGTTCTTTGATGAGGAGGCAATGTTTAACATGCCTGCATTGCTTGATAGCATGGCGGAGGGTTTGCTTATAACACCACCGTCCATGAAGCGAGGAGCTTTTCATGATGATGATGAATTTCAAACTGACCTCACTCTCTGGAATTTCGATTAA 801 0.4719 MFSSSLSLSHGVMVYIYIPLFNTLACINQVSAIVMEFENNEESLYYYSSSSSLSSSTSSQTQRSAISPPPSSSSPSRSQKRRSGRKKFREMRHPVYRGVRRRNGNKWVCEVREPIKKSRIWLGTYATPEMAARAHDAAVLALRGTSATFNFPLSVPLLPLAESSSPQHIREAASKAAQQTSNNDITNPPVSSSNMNLCVGVDDGGGSGGVGSISSTTFFDEEAMFNMPALLDSMAEGLLITPPSMKRGAFHDDDEFQTDLTLWNFD 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00619 266 PRINTS Ethylene responsive element binding protein signature 96 107 IPR001471 GO:0003700|GO:0006355
Aip08g00619 266 PRINTS Ethylene responsive element binding protein signature 118 134 IPR001471 GO:0003700|GO:0006355
Aip08g00619 266 SUPERFAMILY DNA-binding domain 95 154 IPR016177 GO:0003677
Aip08g00619 266 ProSiteProfiles AP2/ERF domain profile. 95 152 IPR001471 GO:0003700|GO:0006355
Aip08g00619 266 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 35 264 IPR045277 GO:0003700
Aip08g00619 266 Pfam AP2 domain 94 144 IPR001471 GO:0003700|GO:0006355
Aip08g00619 266 MobiDBLite consensus disorder prediction 56 78 - -
Aip08g00619 266 CDD AP2 96 154 IPR001471 GO:0003700|GO:0006355
Aip08g00619 266 SMART rav1_2 95 158 IPR001471 GO:0003700|GO:0006355
Aip08g00619 266 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 35 264 - -
Aip08g00619 266 MobiDBLite consensus disorder prediction 56 92 - -
Aip08g00619 266 Gene3D AP2/ERF domain 95 154 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00619 Aip-Chr8 5644861 5645661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00619 52 266 AP2-EREBP Transcription Factor Family AT5G51990 46.296 1.70e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aip08g00619 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00619 - - aip:107610400 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00619 08 5644861 5645661 Aip08g00619 08 5644861 5645661 ECH