Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00615 ATGAGATTGGAGAAGTGTTGGTTTTGTTCCTCAACCGTATATCCTGGTCATGGAATCCAGTTCGTTCGTAATGATGCCAAGATTTTTCGATTTTGTAGGTCTAAATGCCATAAGAACTTTAAAATGAAGAGGAACCCTCGTAAGGTCAAATGGACCAAGGCATATCGAAGAGTGCATGGAAAGGATATGACTCAGGATTCAACGTTTGAATTCGAGAGGAAGCGGAACAAACCTGAGAGATATGACAGGAACCTTGCTGAGAATGTGCTTAAGGCCATTCCTAAGATTGATAAAATCAGGGTCACCAGAGAGGAGAGACACCATAAGAATAGGATGAAGGGAAACAAGGTGAAGGTGCAGAGGGAGGCTACGAAGGAGTTGGAGCAGGCATGTACTTCAAAATCTGATAAACTATTCCTGCGAATTCAGAGGGTTTTAGGGTTTCCATTCGAGGAGAAAGCCTTGAAAAAAATGGCTTCAATGGCAGCAAGAAGATCCAGCAGCACAATCGTGCGAACCATCTGTAGAGCCACCGCGAAATCGACGGCAGGGAGGTCATCATCCTCGTCCTTCCCTTTGCGCGATTCCAATCTCGGTTTTCGGCATAATAACAACCGTATCGCTCCGGCGAGGTTCTCGCTCCTCCGAAGAGAATTGAGCTCCTTGAAGCCATTGCACACAGCCATTGCTTCATCTTACCTTGTTTCCAAGCTTCCCACCGAAGCTACCACCTCCTCACAAGGGAGGTTTGCTAACTATGTCAGTCCAATCTAA 774 0.4599 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNKPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGNKVKVQREATKELEQACTSKSDKLFLRIQRVLGFPFEEKALKKMASMAARRSSSTIVRTICRATAKSTAGRSSSSSFPLRDSNLGFRHNNNRIAPARFSLLRRELSSLKPLHTAIASSYLVSKLPTEATTSSQGRFANYVSPI 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00615 257 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Aip08g00615 257 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Aip08g00615 257 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Aip08g00615 257 PANTHER 60S RIBOSOMAL PROTEIN L24 1 130 IPR000988 -
Aip08g00615 257 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Aip08g00615 257 SMART 4TRASH 6 44 IPR011017 -
Aip08g00615 257 PANTHER BNAA04G10330D PROTEIN 1 130 - -
Aip08g00615 257 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00615 Aip-Chr8 5566540 5570756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00615 1 129 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 76.744 4.87e-72 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00615 K02896 - gmx:100778077 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00615 08 5566540 5570756 Aip08g00615 08 5566540 5570756 ECH