Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00608 ATGCAGTTCACGATAATTGTAGTAATCTTGTTCTTTATCGTTCCCTTGGCATTGGCTGATCTAAGGGTTGGTTTCTATAGTTCAAGCTGCCCAAAAGCAGAAGCCATTGTACGAAAAGTTGTTCAAAGGAACTACTTGTACATTGATAGATCCATCGCCGGAGGCTTGCTTCGCTTGCACTTTCATGATTGTTTCGTTCGAGGTTGCGATGCCTCCATATTAATAGACCCAACAGAGGACAACGAATCTGAGAAAGATGCAGAAGCTAACGAAACCGTTAGGGGTTTCGAGATCATCGACAAGGCCAAGAAGAAGCTAGAAAAAGTGTGCCCTTCAACAGTTTCGTGTGCAGACATCATTGCGCTGGCAGCAAGAGACGCCGTCTCCATCACCGGAGGTCCATGGTACGCCGTTCCCACCGGCCGACGCGACGGGTTTGTCTCGAATCCTTCAAACGCAGAGATCCTTCCAGGACCAAGTTCAACAGTGTCACATGCCCTTCAAATCTTTACATCAAAGGGCATGACACTTGGCGAAATGGTAACCCTTATGGGAGCACACACCATTGGTTATGCTCATTGTGGTTTCTTCAGGAAAAGGCTTGAAGGTAGAGACTCAACAATGGATCCTTCTCTGAACGAGAAGCTTGTGAGGCTTTGTGGGAATAGTAGTAGTAATAATAACAACCCTACGACGTTTTTGGATCAGAACACTTCTTTTGTATTTGACAATCAATTCTATGAAGAGATCGTTAACAAGAGAGGGGTGCTTTTCATTGACCAGCAGTTGGCTCTGGATTCTTCGACTAAAGGGTTGGTCTCCAAGTTCGCCACAGATGCTGAGAGCTTTCGACGAAGCTTTGTGAATGCCATTGTCAAGATGGGAAGCATTGGTGTTTTGGTTGGAGATGATGGCGAGATTAGAACTCGTTGCTGGGATTACAATAATAATAATAGTGATCCTTAG 966 0.4513 MQFTIIVVILFFIVPLALADLRVGFYSSSCPKAEAIVRKVVQRNYLYIDRSIAGGLLRLHFHDCFVRGCDASILIDPTEDNESEKDAEANETVRGFEIIDKAKKKLEKVCPSTVSCADIIALAARDAVSITGGPWYAVPTGRRDGFVSNPSNAEILPGPSSTVSHALQIFTSKGMTLGEMVTLMGAHTIGYAHCGFFRKRLEGRDSTMDPSLNEKLVRLCGNSSSNNNNPTTFLDQNTSFVFDNQFYEEIVNKRGVLFIDQQLALDSSTKGLVSKFATDAESFRRSFVNAIVKMGSIGVLVGDDGEIRTRCWDYNNNNSDP 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00608 321 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 CDD secretory_peroxidase 21 311 IPR033905 GO:0004601|GO:0042744
Aip08g00608 321 Gene3D - 24 314 - -
Aip08g00608 321 PANTHER PEROXIDASE 25-RELATED 11 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PANTHER PEROXIDASE 44-RELATED 11 314 - -
Aip08g00608 321 Pfam Peroxidase 38 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 ProSiteProfiles Plant heme peroxidase family profile. 20 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Aip08g00608 321 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 SUPERFAMILY Heme-dependent peroxidases 20 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip08g00608 321 Gene3D Peroxidase, domain 2 157 294 - -
Aip08g00608 321 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00608 Aip-Chr8 5448015 5450033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00608 4 316 Peroxidase AT4G26010 53.503 1.74e-116 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00608 K00430 - gmx:100777946 369.007