Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00601 ATGCCCTCTGTTAATTGCTCAAAAGTTTCACATGGCATCAAAGTACAAGAATTGGGGAAGCTTATCCCTTATGAGTTGACTGTGAATCCTGGACAGGATGTGGCGAAGGAGATATTGGAGGCATGGGGAGCAAGCAATCGGTTTGGTTGCATACTTTCTGCTTCTGGTAGTATAGCAAGAGCCGTATTTGGCAGACCAAACTCAAATGAAATTCGTATATATGAGGGGAGCTTTGAGATTCTGTCAATGTCTGGACTTTATATGCTGCGAGACGATGGTTCTGAAGCTTCGAGTTTGAGCATCACACTGGCTGCTTCTAATGGAACTGCTTTTGCTGGTACCCTCATCAACACCTTGATGGCCAATGACACTGTTCAAGTAAGAATTTTTAGAGTATCTCTTAACTTATTTTTCACCTGTTCTCAGCgtttgtag 435 0.4207 MPSVNCSKVSHGIKVQELGKLIPYELTVNPGQDVAKEILEAWGASNRFGCILSASGSIARAVFGRPNSNEIRIYEGSFEILSMSGLYMLRDDGSEASSLSITLAASNGTAFAGTLINTLMANDTVQVRIFRVSLNLFFTCSQRL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00601 144 CDD DUF296 23 129 IPR005175 -
Aip08g00601 144 ProSiteProfiles PPC domain profile profile. 18 144 IPR005175 -
Aip08g00601 144 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 19 128 IPR039605 GO:0003680
Aip08g00601 144 Gene3D - 24 137 - -
Aip08g00601 144 SUPERFAMILY AF0104/ALDC/Ptd012-like 23 131 - -
Aip08g00601 144 Pfam Plants and Prokaryotes Conserved (PCC) domain 24 130 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00601 Aip-Chr8 5321184 5322122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00601 24 127 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 41.667 2.71e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00601 - - aip:107610408 282.722