Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00584 ATGTTTCTTCCATTTGAAAGCGTTCTCGGAAATCCGTTATTCATCTTCAACCACTCCAATGGCGAATTGAGCGTGACCTCTAGGGTTTTCTTATTGCTTCCTTTCTCGTTATCCCAGGAAGGACTAGCACCATCGTCATCAATGGATTTGTCCAAGGTTGGAGAGAGGATCTTGAACTCCGTCATATCCACCACATCGCGCAGCCAGCTGCTTCCCCTCTCCGATCGCCCCGAGATTCCTGCTCGAGCTGCTGCGGCAGCTGCAATTGCTCGTGCTATTGCAAGATTGCCTCCTCACCAGAGGTATAGCCTTTCAACGAGTTCCGAGGAGTTGAGTTCCATATATGGGAGGAGACCTCATGATCAAGTGGTGGAGGAACTGGAGGATGGATTCTATGAAGAGGATTTTGATCCAGTTAGGCATGTTTTGGAGCATCTTTCAGCTAACGAAAACGAGAAGATATATTTTGAAAAACAGGCTGCCCTTAGATTGACACAATTGGATAGAGTAGCGGAGCATTTATCACGTCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGGGAATTAGAAAGAGACTTGAGGATTGCTAATGTCATCAGCATGGACCTGCTTCCAATCTTGACTGAACTTCATCGTGCATTTGTTATGAAATCAACACTTGAATCCCTCGTTGAGGAAGGGAGTTACTGCAAGGCATTTCAAGTGTTTTCTGAGTATTTGCAAGTCTTAGATAGCTTGTCAGAGCTCTCAGTAATACAAGAGATGAGTCAGGGTGTGGAGGTTTGGCTAGGAGTAACTCTACAGAAGCTGGATGGTCTTTTATTGGAAATATGCCAGGAGTTCAAGCAAGATGGTTATATAACAGTAATCGATGCATATGCATTAATGGGAGATACAACTGGCCTTGCTGAAAAGATACAAAGTTTCTTCATGCAAGAAGTTATATCAGAAACCAACTCTGTGTTAAAATTTATTGTGCAAGAGGAGGAAGAGTTTCCTTCACAAAATAGTAGGCTCACTTACAGCGATCTATGCCTTCACATACCTGAATCTAAGTTTAGACAGTGCTTATTAAGAACATTGGCTATTCTATTTGAAATTATGTGTTCATACCACGAAATTATGGATTTTCAGCTAGAAAGAAAGGATTCAGTAGACCAAACTTCAAATACGTGCAACAATGACATTTCCTGCAGTCCAGGTGAGGCTCAGGAAGTTGTTTCAGATGTAAGAGCCAGCAACAATTCTGTGTTCAGTCCTGGGGATGTAATGTGTGGCTCGTCTTATAGGGAGGAATCTGCAACAGTTACCTCACTAGCTGAAAATAATGTAAATGATGGTTCACCATCAAGTGGTTCTCATGATCCAGTTGCTGAGGCTTCTAGAAAGGAGGACAATATAGAATCAAGCATTGATTCCCCATGGTATCATCTTCGCAAAGAAGCAACAGCATTTGTTTCACAAACTCTTCAAAGAGGATGCAAGAATTTATGGCATCTTACTACTAGTCGTGTGTCAGTATTGATTTCTTCTTCTGCTGCTGCTTCTGCTAGTATTCATCAGTTCCTGAAAAATTATGAAGACCTCACTGTCTTCATATTGGCTGGGGAAGCCTTTTGTGGAATTGAAGCAGTTGAATTCAGGCAGAAGTTGAAGCTCGTCTGTGAAAACTATTTTATAACTTTTCATAAACAAAATGTACATGCACTTAAAGTGGTTTTGGAGAAAGATTCTTGGTTAAAATTACCTCCAGATACAGTGCAACTTGTCAGTTTTGCTGGACTTACTGGTGATGGTGCACCATTGATTTCTTTAACTAATACCAAATCAACTAATACCAGTGCAATTGATTTGGATAAATCAGTAAACTTCACACACAGTAGAGCTAGGAAAAGTGGGTTTTCTGATTGGATTAGAAGGGGAAACCCATTTTTGCTAACATCATCAACCCCTAAAGAAGGTCATTCCCAACCCAATGGAATGATTCATGGTGATATTATTGATGGGGGCTCAAGAAACAACTTCGGGGGTGATAAAGTCCAGCCTAAGAAAAATGATTCAGTTCAAATGAAGGGTGATGATTCTGTTTCTGAAGATGAAAATGAGGATCTTCTTGCTGACTTTATTGATGAAGACAGCCAACTACCTAGTCGAATTTCAAAACTGAATCTTAAAAGAGGTTATGCTTCCCATTGTAATGATGATGAGAATACAGCACACACTGGATCTTCGCTATGTTTGCTAAGGTGTATGGATAAATATGCAAGGCTTATGCAGAAAATAGAAGTAATAAATGTTGAATTCTTTAAGGGAATATGCCAGTCGTTTGAGATTTTTTTCCATTTTATATATGAAACTTTTGGTCAGCTGAATAGTAGTTCAAGTGGAAAAAGTTCACCCTGTTCTCATAATCATCGGCTGAGGACAGCCTTGTCCAGAATAAAGCAAGACTGTGACATGTGGATGATGAAACCCCAGTCATCACCCACGTCTTTAGGTTCACCATTTGTACATGCAGAGTTGACCCCTACAAGTCCTCCTGGCATGAATTTTGGTCATTCTTCAGGGAATTCATTGGGTCTCACGGAAAGGTGTGTAGCTGTTGACGCTCTGTCTCTTGTTGCTCGGACACTGAATAGATCCAGAGCTCATCTCCGATCAATGCTTTTGCAGAGTAATACAACTGTACTTGAGGATTTCTATGTGCATCTGGTGGATGCTGTTCCAGATCTTATAGAGCATGTTCATAGGACAACAGCAAGACTCCTTCTTCATGTTAATGGGTACGTCGAACGCATTGCCAATTCTAAATGGGAAGTGAAAGAGCTAGGTCTAGAGCATAATGGGTATGTTGATTTATTGCTGGGGGAATTTAAGCATTATGCAGCGCGACTTGCTCATGGTGGAATTCGTAAAGAGATTCAAGACAAACTATTGGACTATGGACTTGAGATCCTAGCAGAAACGCTTGTCGAAGGACTTTCACGGGTGAAGAGATGTAGTGATGAAGGACGAGCTCTAATGTCCTTGGATCTGCAGGTTTTAATCAATGGGCTACAACATCTTTTGTCGTTGAATGTGAAGTCCAAGCTACAAATGGTTGAAACTTATATCAAGGCTTACTACCTTCCTGATAAAGAATATGTGCAATGGGCACATGCACACCCGGTATATAGTAAAAGCCAGATTGTTGGACTGGTCAACCTTGTCGCCTCTATGAAAGGTTGGAAGCGGAAAACCAGGTTGCAAGTGCCATCATGGCTTGAAAATCTATTGTCGACAAGATTCTTCTCTCTGTGCAATGTGCACAAGAAACAATCTAGGAATGAATGCAAAATGTTCTGTCTCGATTGCAACAATGAAGCATATTGCGCACATTGCATAGCATATTCTCATGAAAAACACCGAGTTGTTCAGATAAGGAGATCATCGTATAATGATGTTGTGAGGGTGATAGAGATTGAAAATGCATTGAACATAAGTGGGATTCAGACATATAGGATCAATGGTTTCAGGGTCCTTTTCCTTATTACAAGGCCTCTCAATCCCAAAAAGAACAAGATTTCTGCCAAAGTTGGTTTTGGATACAACACTAACTGTGTGATGTGCACAAGGATCATCGTTCAGCCTTATGTTTTCTGCTCTTTGGAATGCAAGCTTATGTGGACAAAGCAGAGTGAGAGTGAAAGCTTTGCAATAGAAGGAATTTCAAGAACCATGTTATCAGCAGAGGAAGAGGAAGAGTTGCACAAAAAGCTCGAACCAGAAAGACTTCTTGAACGCCGACAATGGCCTTCTCCGTGTGCTCAGCCGCTGCCGCCGCCGCCGCTATTCAATAATGCAAATTCTAGGAAAAGAAAGGGAATACCTCGAAGGTCTCCTCTTATGTAG 3909 0.4129 MFLPFESVLGNPLFIFNHSNGELSVTSRVFLLLPFSLSQEGLAPSSSMDLSKVGERILNSVISTTSRSQLLPLSDRPEIPARAAAAAAIARAIARLPPHQRYSLSTSSEELSSIYGRRPHDQVVEELEDGFYEEDFDPVRHVLEHLSANENEKIYFEKQAALRLTQLDRVAEHLSRHVMEHHEVMVKGMNLVRELERDLRIANVISMDLLPILTELHRAFVMKSTLESLVEEGSYCKAFQVFSEYLQVLDSLSELSVIQEMSQGVEVWLGVTLQKLDGLLLEICQEFKQDGYITVIDAYALMGDTTGLAEKIQSFFMQEVISETNSVLKFIVQEEEEFPSQNSRLTYSDLCLHIPESKFRQCLLRTLAILFEIMCSYHEIMDFQLERKDSVDQTSNTCNNDISCSPGEAQEVVSDVRASNNSVFSPGDVMCGSSYREESATVTSLAENNVNDGSPSSGSHDPVAEASRKEDNIESSIDSPWYHLRKEATAFVSQTLQRGCKNLWHLTTSRVSVLISSSAAASASIHQFLKNYEDLTVFILAGEAFCGIEAVEFRQKLKLVCENYFITFHKQNVHALKVVLEKDSWLKLPPDTVQLVSFAGLTGDGAPLISLTNTKSTNTSAIDLDKSVNFTHSRARKSGFSDWIRRGNPFLLTSSTPKEGHSQPNGMIHGDIIDGGSRNNFGGDKVQPKKNDSVQMKGDDSVSEDENEDLLADFIDEDSQLPSRISKLNLKRGYASHCNDDENTAHTGSSLCLLRCMDKYARLMQKIEVINVEFFKGICQSFEIFFHFIYETFGQLNSSSSGKSSPCSHNHRLRTALSRIKQDCDMWMMKPQSSPTSLGSPFVHAELTPTSPPGMNFGHSSGNSLGLTERCVAVDALSLVARTLNRSRAHLRSMLLQSNTTVLEDFYVHLVDAVPDLIEHVHRTTARLLLHVNGYVERIANSKWEVKELGLEHNGYVDLLLGEFKHYAARLAHGGIRKEIQDKLLDYGLEILAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLQHLLSLNVKSKLQMVETYIKAYYLPDKEYVQWAHAHPVYSKSQIVGLVNLVASMKGWKRKTRLQVPSWLENLLSTRFFSLCNVHKKQSRNECKMFCLDCNNEAYCAHCIAYSHEKHRVVQIRRSSYNDVVRVIEIENALNISGIQTYRINGFRVLFLITRPLNPKKNKISAKVGFGYNTNCVMCTRIIVQPYVFCSLECKLMWTKQSESESFAIEGISRTMLSAEEEEELHKKLEPERLLERRQWPSPCAQPLPPPPLFNNANSRKRKGIPRRSPLM 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00584 1302 MobiDBLite consensus disorder prediction 679 701 - -
Aip08g00584 1302 Pfam PLATZ transcription factor 1147 1226 IPR006734 -
Aip08g00584 1302 PANTHER UNCHARACTERIZED 28 208 IPR040047 GO:0032456|GO:0042147|GO:1990745
Aip08g00584 1302 PANTHER UNCHARACTERIZED 207 1097 IPR040047 GO:0032456|GO:0042147|GO:1990745
Aip08g00584 1302 MobiDBLite consensus disorder prediction 446 472 - -
Aip08g00584 1302 MobiDBLite consensus disorder prediction 446 461 - -
Aip08g00584 1302 Pfam Vacuolar-sorting protein 54, of GARP complex 206 383 IPR019515 -
Aip08g00584 1302 MobiDBLite consensus disorder prediction 1270 1302 - -
Aip08g00584 1302 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 28 208 - -
Aip08g00584 1302 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 207 1097 - -
Aip08g00584 1302 Pfam Protein of unknown function C-terminus (DUF2451) 865 1090 IPR019514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00584 Aip-Chr8 5136730 5160794 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aip08g00584 DUF2451 3.7e-70 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00584 K23288 - gmx:100788476 1556.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00584 08 5136730 5160794 Aip08g00584 08 5136730 5160794 ECH