Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00563 ATGGCCAAGTTAAGTGCTAGAAGCATGAAGAAGAGTGCTACTAGTAACAGTTTCAGGTTTGTGGTGGAGAAACTAATTCATAAGAGTTTGTTAATGGGGAGCAACAACAAGAAGTCATCATCTTGTAATGATTGTGTGCCTGAGGATGTGAAAGAAGGACATTTTGCAGTGATTGCTGAGGGTGGTGGTGATGATGAGGAAGCTCCAAAGAGGTTGGTGATGCCACTGAGTTGTTTGAGAAACCCAGCATTCTTGAGGCTATTGGAGCAGGCTGAAGAGGAGTATGGCTTTGACCATGAAGGTGCACTCACCATTCCTTGCACCCCTTCTCAACTTCAAAGGATACTACTTCTTGAACAGCAACAAACTACCAACAACAACAACAACCACCTCTTCAACTTCTCAACTAATCACCTCCAATTCATCATCTCATAA 435 0.4299 MAKLSARSMKKSATSNSFRFVVEKLIHKSLLMGSNNKKSSSCNDCVPEDVKEGHFAVIAEGGGDDEEAPKRLVMPLSCLRNPAFLRLLEQAEEEYGFDHEGALTIPCTPSQLQRILLLEQQQTTNNNNNHLFNFSTNHLQFIIS 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00563 144 Pfam Auxin responsive protein 34 116 IPR003676 GO:0009733
Aip08g00563 144 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 21 126 - -
Aip08g00563 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 126 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00563 Aip-Chr8 4825616 4826355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00563 21 116 Calmodulin-binding Proteins AT3G43120 35.644 6.40e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00563 - K14488 aip:107612303 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00563 08 4825616 4826355 Aip08g00563 08 4825616 4826355 ECH