Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00553 ATGTGGTTTGGTGAAAGTGAAGCCAATGTTAGAGAAACTTTTGACAAGGCTAGACAGTCGGCTCTGTGTGTCCTCTTCTTCGATGAGCTCGACTCCATTGCCACTCAGAGAGGAAGCAGTGTTGGGGATGCTGGTGGTGCTGCTGACAGAGTTTTGAATCAACTTCTGACTGAAATGGATGGCATGTCAGCCAAAAAGACCGTGTTCATAATTGGGGCAACTAACAAACCGGACATCATGGACCCAGCACTTATTCGGCCAGGCCGTCTGGATCAATTGATCTATATTCCTCTTCCCGATGAGGATTCTCGTCACCAGATCTTCATGGCCTGCTTGAGGAAGTCACCTGTGTCCAAAGATGTTGATTTGAGAGCACTGGCCAGATATACTCAAGGATTCAGTGGTGCTGATATTATTGAGATATGCCAGCGAGCATGCAAATATGCTATTAGAGAAAACATCGAAAAGAACGAGAGAGGAGGAAAAGTGAGAAACGAAGATGTCGTAGATGACGAAGTTGCAGAGATAAATGATGCTCATTTTGAAGAGTCAATGAAGTTTGCCCGCAGGAGTGTCAGCGACGCAGATATTCGCAAATACCAGGCATTTGCTCGGACCTTACAGCAGTCGAGGGGATTCGGAAGTGAGTTTAGGTTTCCAGAAAGTGCTGAGAGGACTACTGGATCTGATCCCTTTGCAACTGCTGGGGGCGCAGCTGATGAGGATGATCTATATAGTTAG 741 0.4656 MWFGESEANVRETFDKARQSALCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNKPDIMDPALIRPGRLDQLIYIPLPDEDSRHQIFMACLRKSPVSKDVDLRALARYTQGFSGADIIEICQRACKYAIRENIEKNERGGKVRNEDVVDDEVAEINDAHFEESMKFARRSVSDADIRKYQAFARTLQQSRGFGSEFRFPESAERTTGSDPFATAGGAADEDDLYS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00553 246 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 205 IPR027417 -
Aip08g00553 246 Gene3D - 1 98 IPR027417 -
Aip08g00553 246 Pfam AAA+ lid domain 120 157 IPR041569 -
Aip08g00553 246 PANTHER CELL DIVISION CYCLE PROTEIN 48 HOMOLOG 1 223 - -
Aip08g00553 246 ProSitePatterns AAA-protein family signature. 68 86 IPR003960 GO:0005524|GO:0016887
Aip08g00553 246 Pfam ATPase family associated with various cellular activities (AAA) 2 98 IPR003959 GO:0005524|GO:0016887
Aip08g00553 246 MobiDBLite consensus disorder prediction 214 246 - -
Aip08g00553 246 PANTHER AAA-FAMILY ATPASE 1 223 - -
Aip08g00553 246 CDD AAA 9 98 - -
Aip08g00553 246 Gene3D - 102 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00553 Aip-Chr8 4708044 4709015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00553 2 167 Calmodulin-binding Proteins AT3G56690 35.503 4.18e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00553 K13525 - gmx:547850 422.165