Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00547 ATGACTTCAATGAAGAATGAGAATGAGAGCAGTGTTCCATATTCTTCTTCTCCTTTGTCTGCCCAAAACCAAAGACCCATGGAAATTGCACCCATGACAGCAGCCAACAACAACGCAATCAGCACTGCCATGTCCAGCAGACGCAGAAAGGACCGCCACATCAAGGTGGAAGGCCGAGACCGCCGTGTCCGCATGTCCATCGCATGCGCCGCCTTTGTCTTCCAACTCACTCGCGAGCTCAACAACAAGAGCGACGGCGAGACTATTGAGTGGCTCCTCCGCCAAGCAGAGCCCTCCATTATCGCCGCCACCGGCCACGGTGTTCCACCCATCATCGGTAACCCCCCAGCCCCAGCGGCACCAGGAGATAACCCCATTCCCGCTTCTCATTCAGTTCCGGTATCTGCTTCTGCTTCTACTGCAGTTGCACCACCACCACCACCAGCACCACCAAGCGAGGAAAACGAGTTTGTCGACGAGGGTGCAATAGATGAGCCATGTTTTTCAACCTTGGATGATTTTGATTTGCTTGGCAACCCTATCGACTGGGATTTCAATTTGATGTAA 567 0.5309 MTSMKNENESSVPYSSSPLSAQNQRPMEIAPMTAANNNAISTAMSSRRRKDRHIKVEGRDRRVRMSIACAAFVFQLTRELNNKSDGETIEWLLRQAEPSIIAATGHGVPPIIGNPPAPAAPGDNPIPASHSVPVSASASTAVAPPPPPAPPSEENEFVDEGAIDEPCFSTLDDFDLLGNPIDWDFNLM 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00547 188 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 23 113 - -
Aip08g00547 188 MobiDBLite consensus disorder prediction 112 164 - -
Aip08g00547 188 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 113 IPR005333 GO:0003700
Aip08g00547 188 MobiDBLite consensus disorder prediction 1 28 - -
Aip08g00547 188 Pfam TCP family transcription factor 48 106 IPR017887 -
Aip08g00547 188 ProSiteProfiles TCP domain profile. 49 103 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00547 Aip-Chr8 4592750 4593316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00547 50 110 TCP Transcription Factor Family AT5G23280 78.689 4.04e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip08g00547 TCP 1.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00547 - K16221 aip:107610427 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00547 08 4592750 4593316 Aip03g00318 03 3045361 3045780 PCT