Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00537 ATGGGGAATCATGGAGAGAACGGTAGTAACGGGGAGGTGGCCAGGAAGGAGAAGGAGGCGGACGCTTTGAAGTGGAAGGAGGCGGCAGAGGGATTGCAGGGGAGCCATTTTGAGGATGTGGAGGAGGGGGCGAGGGAGGGAGTGGAAGCAAGCAGTGAGTGGGTGATGGAGAGCATGCGGAGAGGGATAGACTGTTACGGCGTCACAACTGGGTTTGGTGCAACCTCACACCGGAGAACTACCCAAGCTGTTGCCCTTCAAACTGAGCTCATTAGGTTTTTGAATGCTGGAATATTTGGGAATGGCAAAGAATCATGTCATACTCTGCCACAAAGTGCAACAAGGGCTGCAATGCTGGTTCGAATCAACACACTCCTTCAAGGCTACTCTGGCATTAGATATGAGATTCTAGAAGCCATTGCAAAGCTCCTCAACAATAACATCACACCAGTAGTGCCATTGCGTGGCTCAATTTCCGCCTCCGGAGACTTGGTTCCATTTTCATACATAGCAGGACTACTCACAGGGAGGCCTAATTCGAAGGCCTTCGGTCCAAATGGCGATACACTCACGGCCGAACAAGCCTTCAATCTAGCCGGCATTGGTAGCGAATTCTTCGAGTTGCAGCCTAAGGAGGGTCTTGCACTTGTCAATGGAACTGGTGTTGGTGCTGGTTTGGCTTCAATAGTCTTATTTGAGGCCAACATCTTAACCATTTTATCCGAAATCGTGTCTGCGATTTTCGCAGAAGTGATGCAGGGTAGGCCAGAGTTTACAGATCATTTGACTCACAAATTGAAGCATCACCCTGGTCAGATTGAAGCAGCAGCACTCATGGAACATATCTTGAATGGAAGTGCTTATGTTAAATCAGCACAGAAATTGCATGACATTGAGCCTTTTCAAAAGCCAAAGCAAGATAGATATGCTCTTAGGACTTCGCCGCAGTGGTTAGGACCACAAATTGAAGTGATTCGTTTGTCAACCAAGTCCATTGAAAGAGAGATCAACTCTGTGAATGACAATCCCTTGATCGATGTTTCAAGGAACAAGGCTTTGCATGGTGGCAATTTTCAAGGTACACCGGTTGGTGTTTCAATGGACAATACAAGGTTAGCACTGGCTGCAATTGGAAAACTCATCTTTGCACAAATGTCTGAGTTGGTCAATGAGTTCTATAACAATGGTTTACCTTCAAATCTCTCTGGGGGGCAATGTCCTAGCTTGGATTATGGATTCAAGGGTGCTGAGATAGCCATGGCTGCATATTGTTCTGAGCTTCAGTATCTGGCAAACCCAGTGACAAATCATGTGCAAAGCGCGGAACAACACAACCAGGATGTGAATTCATTGGGGCTGATCTCAGCTAGGAAAACAGCTGAAGCTGTTGAGATATTAAAGCTCATGTTTTCAACCTACTTGGTTGCTCTATGTCAGGCTATAGATTTGAGGCATTTGGAGGATAATATGAAGATCACAGTTAAGAACACAGTGAGCAGAGTAGCTAAGAAAGTCCTCAATCTAAGTGTCAATGGGGAGCTTCATCCTCATCCTTCAAAATCTTGTGAGAAAGATTTGCTCAAAGTGGTTGATTGCGAGCATGTCTTCACCTATATTGATGACCCCTGTAATCCTGCATACCCTTTGATGCAGAAACTGAGGCTAGTGCTTGTGGAACATGCGTTGATGAGGAGTAGCAATGGCTTGAAAAGCACGAGTGCGACCATCTTTGCAAAGATTGGCGCTTTTGAGGAGGAACTCAAGAAGGTGCTTCCCAAAGAAGTTGAGGCTACAAGGGATGCTTTTGAGGAAGGGAATGCAGCAAGTCCTAACAAAATTAAGCAGTGCAGATCCTATCCAATCTACAAGTTTGTGAGGGAGGAACTGGGAACAGAGTTTCTAACTGGAGAGAAGATTAAATCCCCTGGTGAAGATTTTGATAAAGTTTTCAATGCAATTAATCAGGGTAAGATAATAGACCCAATCTTTGAATGTCTCAAGGACTGGGATTGCACTCCTCTTCCCATATGTTGGAGCTCCTGA 2043 0.4557 MGNHGENGSNGEVARKEKEADALKWKEAAEGLQGSHFEDVEEGAREGVEASSEWVMESMRRGIDCYGVTTGFGATSHRRTTQAVALQTELIRFLNAGIFGNGKESCHTLPQSATRAAMLVRINTLLQGYSGIRYEILEAIAKLLNNNITPVVPLRGSISASGDLVPFSYIAGLLTGRPNSKAFGPNGDTLTAEQAFNLAGIGSEFFELQPKEGLALVNGTGVGAGLASIVLFEANILTILSEIVSAIFAEVMQGRPEFTDHLTHKLKHHPGQIEAAALMEHILNGSAYVKSAQKLHDIEPFQKPKQDRYALRTSPQWLGPQIEVIRLSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPVGVSMDNTRLALAAIGKLIFAQMSELVNEFYNNGLPSNLSGGQCPSLDYGFKGAEIAMAAYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVEILKLMFSTYLVALCQAIDLRHLEDNMKITVKNTVSRVAKKVLNLSVNGELHPHPSKSCEKDLLKVVDCEHVFTYIDDPCNPAYPLMQKLRLVLVEHALMRSSNGLKSTSATIFAKIGAFEEELKKVLPKEVEATRDAFEEGNAASPNKIKQCRSYPIYKFVREELGTEFLTGEKIKSPGEDFDKVFNAINQGKIIDPIFECLKDWDCTPLPICWSS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00537 680 MobiDBLite consensus disorder prediction 1 20 - -
Aip08g00537 680 SUPERFAMILY L-aspartase-like 34 677 IPR008948 GO:0003824
Aip08g00537 680 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 39 667 IPR005922 GO:0005737|GO:0006559|GO:0016841
Aip08g00537 680 Gene3D Fumarase/aspartase (Central domain) 222 670 - -
Aip08g00537 680 PANTHER HISTIDINE AMMONIA-LYASE 40 677 IPR001106 -
Aip08g00537 680 PANTHER AMMONIA-LYASE, PUTATIVE-RELATED 40 677 - -
Aip08g00537 680 Gene3D - 487 611 IPR023144 -
Aip08g00537 680 CDD PAL-HAL 36 484 IPR001106 -
Aip08g00537 680 Pfam Aromatic amino acid lyase 40 488 IPR001106 -
Aip08g00537 680 Gene3D - 39 220 IPR024083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00537 Aip-Chr8 4453863 4457070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00537 21 677 Monolignol Biosynthesis Gene Families AT2G37040 72.086 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00537 K10775 - vvi:100241575 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00537 08 4453863 4457070 Aip08g00537 08 4453863 4457070 ECH