Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip08g00535 | ATGTGGGGAAAAGAAACCGTCAGAAGAACGCCGAGTAACAATCCTAACAAGAACTTCAGGAAGTTCTTCTCTTCAATACTTAGCAATGAAAATATCAGGTTGAAGAACCCTATGGGTATGCTGATTACGGCACGCATGGTCTTTGTAAATGATATCAGCAATGTGCAGAAGACGCAAATGAGTGATCTGAGCATTCATTGTTTGTGGGATAAACGTTTTTCATTCCTTCTTTCCTACCAATTTTCAGCTCTTGCCCACAAAAATTGCTTATGGCACTCATTTTGTGCAGATGAACCTTCTGAGACTTACCTAAACAAGTGGAAATGTAGATGTTCTTCTTTCCAAAGGAACCATAGATACTCTCTTTCTAATTGTTCTCACTCATGTGATTGCCATTCAGATGCTGAAGATAGTGAATCCTCATGGACATGCATATGTGATACCAATGGATTCCCTAAAGTGGCAGCAGGTGGCCATAGCTCTAGTTGCTTTAAATCCTGCAACTGCACCTGGGGAAGCAAAAGCGTTGCATTAGGTTCCAAGAAACACATTTCAACAAGGACTGTGATAGTAGTTGTGCTTTTAATATGTGTTGTATGCAGCACTCTTGCATTTATTGCCTCAGTTCTATACTATGTCTGCAGAAGAGACAGCTGTTCAATTCAATCACCAATGGTTTTATCAGATAAAGAAACAAGTTACAATAGTACCTCCAACTTAATTAGTCATAGAACATTTTCAGTTCCAGAAACAAAAGCTGCTATTCATTTTCCAGGATGCTTTCAGAAGGCCTCTTTCCTGTTTGGGAGCCATAGAGAAACTTTTCATGGAAGTATCATTCGATTTTCGTTCTCTGAGCTGGAAAATGCCACTGGAAACTTCTCAACTTCCAACATAATTGGACTTGGTGGATGTAGTTATGTATACCGCGGACGACTTAAAGATGGAAGTAACGTGGCAGTTAAGCGATTAAAAGATGAAGGAGGACCTGAAGCAGACACTGAATTTTTCACTGAGATTGAACTATTGTCTAGGCTTCATCATTGTCATCTGGTGCCATTGCTTGGATACTGCTCAGAATTAAAAGGGAAAAATGTTCATAGGTTACTAGTGTTTGAGTACATGCCTAATGGGAATTTGAGGGACCGTTTGGATGGAGTTTTTGGAAAGAACATGGGTTGGTCTACTCGGGTAAATATCGCATTGGGAGCTGCCAGGGGTTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTGCATAGAGATGTCAAATCAACCAACATTCTTCTTGATGAAAATTGGCATGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGATATCTGATGACATACCCAGTTGTCCTGGCTCTCCAGAGAGAATGCAGGGCACATTCGGGTATTTCGCACCCGAGTATGCAATTGTTGGGAGAGCTTCTCTTGAATCTGATGCCACTCCTCTGTTGCAAGATAGCAGGAGACTAATCACAGAGTTGATCGATCCGCGATTGAAAGGAAACTTCCCAGAAGAAGAGGTGAAGGTAATGGCATACTTAGCAAAAGAGTGTTTGCTGTTGGATCCTGACACAAGACCAACCATGAGTGAGGTTGTTCAAATTCTTTCAAGTATTTCCCCTGGAAAATCTAGAAGAAGAATAAGCATTCCACTTAGCCTTTTTCAGGAATCAGAGGATGCAGAGAAGGCAAGGCAAGCTTCTTCATCGGCCAGATTAGCTTATTGTAATTTCATGTCACAAGATACTGAAAACAATCTTCATGTTGTTGGGAATGAAAATGAAAATGTAGATGCATTTTCAACTGAGTATATGGAGAGTTTGATCCTCTTGACTTCAAAAATTCCTGAGAGCTGGCATGCATCAGAAGAGGAAATGGTGATGGATCCTCCTCCTCCAAGCACACCATTGCTAGGTCAAGCTCCCCCTGATGGAGGATTCTTGGATACATGCTTATGGTTTCTGTGCTGCTGTGGTTTATTCAGTTGCTGCTTCCCTCCTCTTTATGAACCAGGACCTCCTCCTCTCTAG | 2049 | 0.4134 | MWGKETVRRTPSNNPNKNFRKFFSSILSNENIRLKNPMGMLITARMVFVNDISNVQKTQMSDLSIHCLWDKRFSFLLSYQFSALAHKNCLWHSFCADEPSETYLNKWKCRCSSFQRNHRYSLSNCSHSCDCHSDAEDSESSWTCICDTNGFPKVAAGGHSSSCFKSCNCTWGSKSVALGSKKHISTRTVIVVVLLICVVCSTLAFIASVLYYVCRRDSCSIQSPMVLSDKETSYNSTSNLISHRTFSVPETKAAIHFPGCFQKASFLFGSHRETFHGSIIRFSFSELENATGNFSTSNIIGLGGCSYVYRGRLKDGSNVAVKRLKDEGGPEADTEFFTEIELLSRLHHCHLVPLLGYCSELKGKNVHRLLVFEYMPNGNLRDRLDGVFGKNMGWSTRVNIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWHAKITDLGMAKNLISDDIPSCPGSPERMQGTFGYFAPEYAIVGRASLESDATPLLQDSRRLITELIDPRLKGNFPEEEVKVMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRISIPLSLFQESEDAEKARQASSSARLAYCNFMSQDTENNLHVVGNENENVDAFSTEYMESLILLTSKIPESWHASEEEMVMDPPPPSTPLLGQAPPDGGFLDTCLWFLCCCGLFSCCFPPLYEPGPPPL | 682 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip08g00535 | 682 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 419 | 431 | IPR008271 | GO:0004672|GO:0006468 | |
Aip08g00535 | 682 | ProSiteProfiles | Protein kinase domain profile. | 294 | 545 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip08g00535 | 682 | SMART | serkin_6 | 294 | 545 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip08g00535 | 682 | Gene3D | Phosphorylase Kinase; domain 1 | 269 | 374 | - | - | |
Aip08g00535 | 682 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN | 89 | 485 | - | - | |
Aip08g00535 | 682 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN | 486 | 634 | - | - | |
Aip08g00535 | 682 | SUPERFAMILY | Protein kinase-like (PK-like) | 274 | 542 | IPR011009 | - | |
Aip08g00535 | 682 | PANTHER | OS01G0253100 PROTEIN | 89 | 485 | IPR045271 | GO:0004714|GO:0006468 | |
Aip08g00535 | 682 | PANTHER | OS01G0253100 PROTEIN | 486 | 634 | IPR045271 | GO:0004714|GO:0006468 | |
Aip08g00535 | 682 | Gene3D | Transferase(Phosphotransferase) domain 1 | 487 | 556 | - | - | |
Aip08g00535 | 682 | Gene3D | Transferase(Phosphotransferase) domain 1 | 375 | 486 | - | - | |
Aip08g00535 | 682 | Pfam | Protein kinase domain | 295 | 474 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip08g00535 | Aip-Chr8 | 4398724 | 4405709 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip08g00535 | 111 | 571 | Receptor kinase-like Gene Family | AT2G28250 | 53.000 | 2.91e-170 | 497 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-XVI | Aip08g00535 | Pkinase | 7.4e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip08g00535 | - | - | gmx:100499641 | 773.467 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip08g00535 | 08 | 4398724 | 4405709 | Aip08g00535 | 08 | 4398724 | 4405709 | ECH | |
Aip08g00535 | 08 | 4398724 | 4405709 | Aip03g00330 | 03 | 3189269 | 3202326 | PCT |