Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00535 ATGTGGGGAAAAGAAACCGTCAGAAGAACGCCGAGTAACAATCCTAACAAGAACTTCAGGAAGTTCTTCTCTTCAATACTTAGCAATGAAAATATCAGGTTGAAGAACCCTATGGGTATGCTGATTACGGCACGCATGGTCTTTGTAAATGATATCAGCAATGTGCAGAAGACGCAAATGAGTGATCTGAGCATTCATTGTTTGTGGGATAAACGTTTTTCATTCCTTCTTTCCTACCAATTTTCAGCTCTTGCCCACAAAAATTGCTTATGGCACTCATTTTGTGCAGATGAACCTTCTGAGACTTACCTAAACAAGTGGAAATGTAGATGTTCTTCTTTCCAAAGGAACCATAGATACTCTCTTTCTAATTGTTCTCACTCATGTGATTGCCATTCAGATGCTGAAGATAGTGAATCCTCATGGACATGCATATGTGATACCAATGGATTCCCTAAAGTGGCAGCAGGTGGCCATAGCTCTAGTTGCTTTAAATCCTGCAACTGCACCTGGGGAAGCAAAAGCGTTGCATTAGGTTCCAAGAAACACATTTCAACAAGGACTGTGATAGTAGTTGTGCTTTTAATATGTGTTGTATGCAGCACTCTTGCATTTATTGCCTCAGTTCTATACTATGTCTGCAGAAGAGACAGCTGTTCAATTCAATCACCAATGGTTTTATCAGATAAAGAAACAAGTTACAATAGTACCTCCAACTTAATTAGTCATAGAACATTTTCAGTTCCAGAAACAAAAGCTGCTATTCATTTTCCAGGATGCTTTCAGAAGGCCTCTTTCCTGTTTGGGAGCCATAGAGAAACTTTTCATGGAAGTATCATTCGATTTTCGTTCTCTGAGCTGGAAAATGCCACTGGAAACTTCTCAACTTCCAACATAATTGGACTTGGTGGATGTAGTTATGTATACCGCGGACGACTTAAAGATGGAAGTAACGTGGCAGTTAAGCGATTAAAAGATGAAGGAGGACCTGAAGCAGACACTGAATTTTTCACTGAGATTGAACTATTGTCTAGGCTTCATCATTGTCATCTGGTGCCATTGCTTGGATACTGCTCAGAATTAAAAGGGAAAAATGTTCATAGGTTACTAGTGTTTGAGTACATGCCTAATGGGAATTTGAGGGACCGTTTGGATGGAGTTTTTGGAAAGAACATGGGTTGGTCTACTCGGGTAAATATCGCATTGGGAGCTGCCAGGGGTTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTGCATAGAGATGTCAAATCAACCAACATTCTTCTTGATGAAAATTGGCATGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTGATATCTGATGACATACCCAGTTGTCCTGGCTCTCCAGAGAGAATGCAGGGCACATTCGGGTATTTCGCACCCGAGTATGCAATTGTTGGGAGAGCTTCTCTTGAATCTGATGCCACTCCTCTGTTGCAAGATAGCAGGAGACTAATCACAGAGTTGATCGATCCGCGATTGAAAGGAAACTTCCCAGAAGAAGAGGTGAAGGTAATGGCATACTTAGCAAAAGAGTGTTTGCTGTTGGATCCTGACACAAGACCAACCATGAGTGAGGTTGTTCAAATTCTTTCAAGTATTTCCCCTGGAAAATCTAGAAGAAGAATAAGCATTCCACTTAGCCTTTTTCAGGAATCAGAGGATGCAGAGAAGGCAAGGCAAGCTTCTTCATCGGCCAGATTAGCTTATTGTAATTTCATGTCACAAGATACTGAAAACAATCTTCATGTTGTTGGGAATGAAAATGAAAATGTAGATGCATTTTCAACTGAGTATATGGAGAGTTTGATCCTCTTGACTTCAAAAATTCCTGAGAGCTGGCATGCATCAGAAGAGGAAATGGTGATGGATCCTCCTCCTCCAAGCACACCATTGCTAGGTCAAGCTCCCCCTGATGGAGGATTCTTGGATACATGCTTATGGTTTCTGTGCTGCTGTGGTTTATTCAGTTGCTGCTTCCCTCCTCTTTATGAACCAGGACCTCCTCCTCTCTAG 2049 0.4134 MWGKETVRRTPSNNPNKNFRKFFSSILSNENIRLKNPMGMLITARMVFVNDISNVQKTQMSDLSIHCLWDKRFSFLLSYQFSALAHKNCLWHSFCADEPSETYLNKWKCRCSSFQRNHRYSLSNCSHSCDCHSDAEDSESSWTCICDTNGFPKVAAGGHSSSCFKSCNCTWGSKSVALGSKKHISTRTVIVVVLLICVVCSTLAFIASVLYYVCRRDSCSIQSPMVLSDKETSYNSTSNLISHRTFSVPETKAAIHFPGCFQKASFLFGSHRETFHGSIIRFSFSELENATGNFSTSNIIGLGGCSYVYRGRLKDGSNVAVKRLKDEGGPEADTEFFTEIELLSRLHHCHLVPLLGYCSELKGKNVHRLLVFEYMPNGNLRDRLDGVFGKNMGWSTRVNIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWHAKITDLGMAKNLISDDIPSCPGSPERMQGTFGYFAPEYAIVGRASLESDATPLLQDSRRLITELIDPRLKGNFPEEEVKVMAYLAKECLLLDPDTRPTMSEVVQILSSISPGKSRRRISIPLSLFQESEDAEKARQASSSARLAYCNFMSQDTENNLHVVGNENENVDAFSTEYMESLILLTSKIPESWHASEEEMVMDPPPPSTPLLGQAPPDGGFLDTCLWFLCCCGLFSCCFPPLYEPGPPPL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00535 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Aip08g00535 682 ProSiteProfiles Protein kinase domain profile. 294 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00535 682 SMART serkin_6 294 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00535 682 Gene3D Phosphorylase Kinase; domain 1 269 374 - -
Aip08g00535 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 89 485 - -
Aip08g00535 682 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE NCRK PROTEIN 486 634 - -
Aip08g00535 682 SUPERFAMILY Protein kinase-like (PK-like) 274 542 IPR011009 -
Aip08g00535 682 PANTHER OS01G0253100 PROTEIN 89 485 IPR045271 GO:0004714|GO:0006468
Aip08g00535 682 PANTHER OS01G0253100 PROTEIN 486 634 IPR045271 GO:0004714|GO:0006468
Aip08g00535 682 Gene3D Transferase(Phosphotransferase) domain 1 487 556 - -
Aip08g00535 682 Gene3D Transferase(Phosphotransferase) domain 1 375 486 - -
Aip08g00535 682 Pfam Protein kinase domain 295 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00535 Aip-Chr8 4398724 4405709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00535 111 571 Receptor kinase-like Gene Family AT2G28250 53.000 2.91e-170 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Aip08g00535 Pkinase 7.4e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00535 - - gmx:100499641 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00535 08 4398724 4405709 Aip08g00535 08 4398724 4405709 ECH
Aip08g00535 08 4398724 4405709 Aip03g00330 03 3189269 3202326 PCT