Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00534 ATGGGTTTTGGTAATTCAAGATCTGTAAGATTTGAAGATGATCTGGAGCTACCAAATAAAAAGAGTGAAAGTAACAATGGTATGAAGGTCAAATACCACATTGATGGAACACAAATAGCAGAGGCTAGTTCCAACAAAAAGGCAGGGAATAAGTTCTTGAAAGGTAGAGTTTTATCAAGAGTGTTCTCAGAGGATTATGAGAGAGTTAAAAGAAGAAAAATAATCTTAGATCCTCGCGGCCAAGCGATCCACAGGTGGAACAAGATCTTCTTGGTGGCAAGCTTGGTGTCTTTGTTTGTGGACCCTTTGTTCTTCTACTTGCCAGTGGTTCAAGATGAAGTGTGCATTGACATTGGAGTAACACTTGAAGTTGCCCTTACTTTGATAAGAACAGTTGGTGATGCCTTCTATGTGATTCAGATTTTCGCCAAGTTTCGCACTGCTTATGTAGCTCCTTCTTCAAGAGTTTTTGGAAGAGGTGAACTTGTCATAGACACTTCCAAGATTGCAGTTAAGTACCTTTTCAAGGGATTTTGGTTAGACTTTCTTGCTGCCCTGCCTATTCCTCAGGTGCTAATTTGGATTATTATCCCAACTCTTAGGGGTTCAACCATGGCAAACACAAAGAATGTGCTTCGGTTTTTCATCATCTTCCAATATGTTCCAAGGCTATATTTGATTTTCCCACTCTCTTCACAAATTGTAAGTGCTACTGGGGTTGTCACAGAAACAGCATGGGCTGGTGCTGCTTACAACCTCATGCTTTACATGTTGGCAAGCCATATTTTAGGAGCTTGCTGGTACCTTCTGTCAATAGAAAGGCAAGAAGCATGTTGGAGAAATGTATGCAATGTTGAGAAGCCATTTTGTGAATATGCATTCTTTGACTGCCGCAGGGTTGGAAATTCCAAAAGAGACTTATGGTTTCTAGCAAGTAACATCACAAACCTATGCTCACCAGATTCTAACTTCTATCAGTTTGGTATATATGCTGATGCTGTCACTTCTCAAGTTACATCCTCATCATTCTTCAACAAGTACTTCTTTTGTCTTTGGTGGGGCCTTAGGAATCTCAGTTCATTAGGACAAGGCCTTCTTACTAGCACTTTTGTTGGAGAAATTATGGTTGCCATTGTTGTTGCAACACTTGGATTGGTTCTTTTTGCATTACTCATTGGTAATATGCAGACATACCTGCAATCAACTACTGTGCGATTAGAAGAGTGGAGGGTGAAAAGAACAGACACAGAACAATGGATGCATCACAGGCAACTACCACAAGAACTTAGACAATCTGTGCGAAAATATGATCAATACAAATGGATGGCTACTAGGGGAGTTGATGAAGAAGCTCTTCTCAAAGGTCTTCCATTAGATCTTCGTAGAGACATCAAGCGCCACCTTTGTCTTGACCTTGTTCGAGGAGTACCATTGTTTGACCAAATGGATGAGAGCATGCTAGATGCAATATGTGAAAGACTAAAACCAGCATTATGCACTGAAGGAACCTACCTTGTAAGAGAAGGGGATCCAGTGAATGAAATGCTGTTCATAATAAGAGGGCACCTTGACTCTTACACAACCAATGGTGGCAGAGCTGGATTCTTCAACTCATGCCGTATTGGGCCTGGTGATTTCTGTGGGGAGGAGCTTCTAACTTGGGCCTTGGATCCAAGGCCCAGTGTTATTCTCCCTTCTTCAACAAGAACTGTTAAGGCCTTCTCAGAAGTTGAGGCTTTTGCACTCATTGCTGAAGATCTTAAATTTGTTGCATCTCAGTTTAGAAGGCTGCATAGTAAGCAACTTAGGCACAAGTTCAGATTCTATTCACACCAATGGAGAACTTGGGCTGCATGTTTCATTCAAGCTGCTTGGAGAAGGCATAAGAAGAGAAAGGATCTTGCTGGATTAAGAGCAAAGGAGAATAATAATAATAATCATATTAATAATAATAATGATTATGTAACAGTTTCTGAGCCTGAGACTCCAACATCAAGGGCTGTGATGATGAGTGGTAGGAAAAGTGTTAGTAGGTCAGATTCTGGTGTAGTTAGCTCTGTGCAGAAGCCAGCTGAGCCTGACTTTTCGGTTGATGAATGA 2100 0.4105 MGFGNSRSVRFEDDLELPNKKSESNNGMKVKYHIDGTQIAEASSNKKAGNKFLKGRVLSRVFSEDYERVKRRKIILDPRGQAIHRWNKIFLVASLVSLFVDPLFFYLPVVQDEVCIDIGVTLEVALTLIRTVGDAFYVIQIFAKFRTAYVAPSSRVFGRGELVIDTSKIAVKYLFKGFWLDFLAALPIPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYVPRLYLIFPLSSQIVSATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWRNVCNVEKPFCEYAFFDCRRVGNSKRDLWFLASNITNLCSPDSNFYQFGIYADAVTSQVTSSSFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMVAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVRKYDQYKWMATRGVDEEALLKGLPLDLRRDIKRHLCLDLVRGVPLFDQMDESMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAFSEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKDLAGLRAKENNNNNHINNNNDYVTVSEPETPTSRAVMMSGRKSVSRSDSGVVSSVQKPAEPDFSVDE 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00534 699 SUPERFAMILY cAMP-binding domain-like 408 604 IPR018490 -
Aip08g00534 699 MobiDBLite consensus disorder prediction 639 699 - -
Aip08g00534 699 Pfam Ion transport protein 86 405 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aip08g00534 699 Gene3D Jelly Rolls 476 596 IPR014710 -
Aip08g00534 699 ProSiteProfiles cAMP/cGMP binding motif profile. 478 563 IPR000595 -
Aip08g00534 699 PANTHER - 4 699 - -
Aip08g00534 699 MobiDBLite consensus disorder prediction 639 686 - -
Aip08g00534 699 Gene3D - 89 402 - -
Aip08g00534 699 SMART cnmp_10 478 609 IPR000595 -
Aip08g00534 699 CDD CAP_ED 478 609 IPR000595 -
Aip08g00534 699 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 699 - -
Aip08g00534 699 PRINTS EAG/ELK/ERG potassium channel family signature 141 150 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip08g00534 699 PRINTS EAG/ELK/ERG potassium channel family signature 258 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip08g00534 699 PRINTS EAG/ELK/ERG potassium channel family signature 347 364 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip08g00534 699 PRINTS EAG/ELK/ERG potassium channel family signature 391 400 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip08g00534 699 PRINTS EAG/ELK/ERG potassium channel family signature 441 448 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aip08g00534 699 Gene3D Helix hairpin bin 405 469 - -
Aip08g00534 699 SUPERFAMILY Voltage-gated potassium channels 78 400 - -
Aip08g00534 699 ProSiteProfiles IQ motif profile. 614 643 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00534 Aip-Chr8 4392031 4395412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00534 48 698 Ion Channels AT2G28260 76.037 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00534 K05391 - gmx:100786868 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00534 08 4392031 4395412 Aip08g00534 08 4392031 4395412 ECH
Aip08g00534 08 4392031 4395412 Aip03g00333 03 3214421 3218378 PCT