Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00520 ATGAATAAACTGTTAATGGAGGAAAATGATCGATTACAGAAGCAGGTGTCGCAGCTGGTGTGTGAGAATGGGTATATGAAGCAGCAGTTGCATACTCTTCAGCCATCAGCAGCAACCACTGATGCAAGCTGTGATCCAGTGGTTTCGAGTTCGACTACTCAGCAATCTATGAGAGATGCTAATAGTCCCGCAGGATTCCTATCAATTGCAGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTTGATTGGGTTCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCTATTTCGCAAAGTTGCAGTGGGGTGGCAGCTCGAGCCTGTGGTCTTGTCAGTCTCGAACCTACAAAGATTGCAGAGATCCTAAAAGACCGCCCCTCTTGGTTTCGGGATTGCCGGAGCCTAGAGGTTTTCACAATGTTTCCCGCTGGAAATGGAGGCACAATTGAACTTGTTTACACCCAGACATATGCTCCTACCACACTGGCTCCTGCCCGGGATTTCTGGACTATTAGATACACTACAACTCTGGAAAATGGCAGTCTTGTGGTTTGTGAGAGGTCACTATCTGGTTCTGGGACTGGGCCTAATGCAGCTGCTGCTGCCCAGTTTGTGAGGGCTGAAATGCGGCCTAGTGGCTACTTGATTCGACCATGTGAAGGTGGAGGATCAATCATTCACATTGTAGACCACCTAAACCTTGAGGCATGGAGTGTGCCAGAAGTGCTGCGACCACTATATGAATCATCAAAAGTGGTAGCTCAGAAAATGACAATTGCGGCGCTACGTTATATCAGGCAAATAGCCCAAGAAACAAGCGGTGAAGTGGTTTATGGCCTGGGTAGGCAACCTGCCGTTCTGAGAACTTTCAGTCAAAGGTTGAGCAGAGGTTTCAATGATGCTGTCAATGGTTTCAATGACGATGGCTGGTCTGTACTGAACTGTGATGGTGCCGAGGATGTAATTATTGCAGTTAGTTCAACCAAGAACTTTAGTGGAACTTCTAATCCAGCAAGTTCCCTTACATTCCTTGGAGGAATTCTGTGTGCAAAAGCTTCTATGTTACTCCAAAACATCCCTCCTGCAGTTTTGGTTCGTTTCCTGAGGGAACATCGCTCGGAGTGGGCTGATTTTAATGTCGATGCCTATTCTGCTGCATCACTGAAATCTGGCTCATATGCCTATCCAGGAATGAGGCCTACAAGATTCACTGGCAATCAAACAATCATGTCCCTTGGACATACAATTGAACATCAAGAGATGCTGGAAGTTATCCGTCTTGAAGGACACTCTCTTGCTCAAGAAGATGCATTTGCCTCTAGGGACGTTCATCTCTTGCAGTTATGTAGTGGAATTGACGAGAATGCCGTGGGGGCTTGTTCTGAGCTCATATTTGCTCCTATTGATGAAATGTTCCCAGATGATGCTCCATTGTTGCCTTCCGGTTTCCGCATTATCCCGTTGGATTCAAAACCAGGTGATAAAAAGGATTCAATGACAGGAAGTCAAACCCTGGATTTGACATCTGGTTTTGAAGTTGGCCCAACAACAAATGGTGCACGCGATGCGGTATCATGTCATAGTGCTCGGTCGGTGTTGACTATTGCCTTCCAGTTTCCTTTTGACAGTAGTCTGCAGGATAATGTTGCTGTCATGGCACGCCAGTACATCCGTAGTGTGATTTCCTCTGTGCAGAGGGTTGCCATGGCGATTTCTCCATCTGGTATAAACCCGGCAATTGGCTCAAAACTCTCTCCTGGTTCTCCAGAGGCTCTTACACTAGCCAACTGGATCTGCTGCAGTTATAGTTATTATTTGGGGGCAGAGTTGCTGAGATCTGATTCTCTCATTGGCGAGTCAGTGCTTAAACATTTGTGGCAACATCAGGATGCCATTTTGTGCTGTTCTTTGAAGTCGGTGCCGGTGTTCATCTTTGCAAACCAGGCCGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATTGGATAAAATATTTGATGAGTCTGGACGCAAGGCATTGTTTGCAGATTTTGCCAAGTTAATGCAGCAGGGGTTTGCATATCTGCCGGCCGGAATCTGCATGTCAACGATGGGGCGACACGTATCGTTCGAGCAGGCCATTGCATGGAAAGTACTTGCAGAAGAAGATAACAGTGTTCATTGCTTAGCTTTCTCTTTCGTGAATTGGTCATTTGTATGA 2244 0.4666 MNKLLMEENDRLQKQVSQLVCENGYMKQQLHTLQPSAATTDASCDPVVSSSTTQQSMRDANSPAGFLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTIRYTTTLENGSLVVCERSLSGSGTGPNAAAAAQFVRAEMRPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGAEDVIIAVSSTKNFSGTSNPASSLTFLGGILCAKASMLLQNIPPAVLVRFLREHRSEWADFNVDAYSAASLKSGSYAYPGMRPTRFTGNQTIMSLGHTIEHQEMLEVIRLEGHSLAQEDAFASRDVHLLQLCSGIDENAVGACSELIFAPIDEMFPDDAPLLPSGFRIIPLDSKPGDKKDSMTGSQTLDLTSGFEVGPTTNGARDAVSCHSARSVLTIAFQFPFDSSLQDNVAVMARQYIRSVISSVQRVAMAISPSGINPAIGSKLSPGSPEALTLANWICCSYSYYLGAELLRSDSLIGESVLKHLWQHQDAILCCSLKSVPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALFADFAKLMQQGFAYLPAGICMSTMGRHVSFEQAIAWKVLAEEDNSVHCLAFSFVNWSFV 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00520 747 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 747 IPR044830 GO:0003700
Aip08g00520 747 MobiDBLite consensus disorder prediction 507 521 - -
Aip08g00520 747 MobiDBLite consensus disorder prediction 40 59 - -
Aip08g00520 747 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 747 - -
Aip08g00520 747 Pfam MEKHLA domain 603 746 IPR013978 -
Aip08g00520 747 Pfam START domain 69 276 IPR002913 GO:0008289
Aip08g00520 747 SUPERFAMILY Bet v1-like 68 280 - -
Aip08g00520 747 CDD START_ArGLABRA2_like 63 279 - -
Aip08g00520 747 ProSiteProfiles START domain profile. 59 287 IPR002913 GO:0008289
Aip08g00520 747 MobiDBLite consensus disorder prediction 500 521 - -
Aip08g00520 747 Gene3D - 103 285 IPR023393 -
Aip08g00520 747 SMART START_1 68 278 IPR002913 GO:0008289
Aip08g00520 747 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00520 Aip-Chr8 4222303 4228051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00520 1 747 Homeobox Transcription Factor Family AT5G60690 80.876 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00520 K09338 - gmx:100804870 1348.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00520 08 4222303 4228051 Aip08g00520 08 4222303 4228051 ECH
Aip08g00520 08 4222303 4228051 Aip03g00345 03 3362083 3368613 ECH