Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00513 ATGCGATTGCTATGGGGGATAAAGTTGCCCATACTCATATTCATTCAACTTTTATGTCTCAGCAAATTATATGCTGAGGCTTTGTTCACTTTGAAAGGTTCACTTGGCAGATCACAGCAATTGGGATGCAGCATTGTGAAGTATCCGTGTCGAATGCAATGGCCGTGTCGCCTTAACTGCTATAAACTAAAAGATCCAGGTGCTTTATCACTGATTCTCTGTGGAATAGCAGCAAAGGTGGATGGAAACAATGACATTCCAACACTTACACCTGTTCAAGAAGCTCAAGTTAACAGGCAGGGTGAAAGAAGGGCTGCTGCCGCCACAGTTGGTGGCGTTGCTGCCGCCTTATTGGTGATTATCATTGTGGTAATTGTGTATATCTGCTTGATGCGTCTTAAAAGAATCATGAGGCAAACATCTGAGAGTGCTTCTTCTATGCCATCTCCCACAGTTGAGATGGGAAGAAGCAACAACTCTCTGCAAGTAAACGAATTGTGTCCATATTATGCACACAATGCAAGGCAGTTAACAATTTTAGAACTAGAACAAGCTACAAGATGTTTCAATCAAAGTAATATTGTAGGTGAAGATAGATTTGGTTTGGTTTACCAGGGCTTGCTTCAAGATGGATCTATTGTGGCTATAAAGAGGAGAATGTCTTCTCTAACGACGAATTTCATCGGCGAGGTGAGGAAGATATCATGCATTCATCATATGAATCTTGTGAAGCTTATAGGCTACTATGAAGATGGCTATCAACAATTACTAGTGTATGAACATCTCCCTAATGGCCATGTAGGGAATCACCTATATGATAGTGAAGGTTTGCCTATTGGAAAGTTAGACTTGTGGAGGAGGTTATCCATTGCTTTAGGAGCATCCAAAGGACTGGAACATCTTCACAGTTTGGATCCTCCTTTGGTTCACACCAATTTCAGAACTCAAAATGTTTTTTTGGATGGAAGTTACACTGCCAAGGTTTCGGATTACGGATTCGGCACATTGCAAAGAGAAGTTGATCAGGCTGCAGCCTCATCTTCATGCATAGATTGCTTTCTTGACCCAGAGTTGAGTTCACCAGAAAACTATACACAGCAGAGTGATGTATACAGCTTTGGAGTCTTCTTACTGGAGTTGATTAGTGGTTGTGAAGTTTATAACAGAAACATGTCAACCTTAGAAGAAAACCTAGTATTCCAGGCAAAGGCAAAGGCAAAGGATAGTGATGGGTTGGAGAAGTTGGTTGATGTAACATTAGGAGAGCATGAAAAAGATGGTGCAAGGAGAATGGTGAGGTTGGCATTATTATGCATAAGCAAGAGTTATAGAAGGCCATCAATGGGGCAAATAGTGCAAGAGCTAGAGCGGATTCAAAGAGAGATTGCTCCTTTTTATTCACAAGTCAATGAGGACATTGGTGTCGTCACTCTTGGGAGTGAACTTTTCCAATAA 1455 0.4131 MRLLWGIKLPILIFIQLLCLSKLYAEALFTLKGSLGRSQQLGCSIVKYPCRMQWPCRLNCYKLKDPGALSLILCGIAAKVDGNNDIPTLTPVQEAQVNRQGERRAAAATVGGVAAALLVIIIVVIVYICLMRLKRIMRQTSESASSMPSPTVEMGRSNNSLQVNELCPYYAHNARQLTILELEQATRCFNQSNIVGEDRFGLVYQGLLQDGSIVAIKRRMSSLTTNFIGEVRKISCIHHMNLVKLIGYYEDGYQQLLVYEHLPNGHVGNHLYDSEGLPIGKLDLWRRLSIALGASKGLEHLHSLDPPLVHTNFRTQNVFLDGSYTAKVSDYGFGTLQREVDQAAASSSCIDCFLDPELSSPENYTQQSDVYSFGVFLLELISGCEVYNRNMSTLEENLVFQAKAKAKDSDGLEKLVDVTLGEHEKDGARRMVRLALLCISKSYRRPSMGQIVQELERIQREIAPFYSQVNEDIGVVTLGSELFQ 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00513 484 SUPERFAMILY Protein kinase-like (PK-like) 169 463 IPR011009 -
Aip08g00513 484 Gene3D Phosphorylase Kinase; domain 1 151 261 - -
Aip08g00513 484 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 76 482 - -
Aip08g00513 484 ProSiteProfiles Protein kinase domain profile. 189 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g00513 484 PANTHER PROTEIN KINASE APK1A, CHLOROPLASTIC-LIKE 76 482 - -
Aip08g00513 484 Gene3D Transferase(Phosphotransferase) domain 1 262 475 - -
Aip08g00513 484 Pfam Protein tyrosine and serine/threonine kinase 192 403 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00513 Aip-Chr8 4138070 4140520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00513 113 462 Receptor kinase-like Gene Family AT4G02010 35.083 2.01e-53 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Aip08g00513 PK_Tyr_Ser-Thr 3.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00513 - - gmx:100815066 644.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00513 08 4138070 4140520 Aip08g00513 08 4138070 4140520 ECH