Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00484 ATGAGCTCCTCAAACAAGAACACCATTAAGAATGGTgatacccataattcccttcagctagaattggggtcaccagtgcagccaagtccaatatggaagctgatggcggtggcctccattgccgccggtatccagtttggctgggctctacagctctccctcctaacaccctacagtcagcttcttggagtacctcaccaatggtcctctttcatctggctttgtggccccatttccggcatggttgtccaacccatagtcggttactatagcgatagatgtacctccaaactcggccgccgtcgtcctttcatccttgccggcgccgctgccgttgccatagctgtttttctcattggctttgccgccgacattggccacgccttaggggacaatctgaccaagaaaacccggccacgcgccgtaggtatttttgtgatcgggttttggatcttggatgtggcgaacaacatgcttcagggcccctgccgagcattcctcggtgaccttgctgccggtgacgaacggaagacgagacttgcaaacgcattcttctccttcttcatggcggtgggaagcgtactgggttacggcgcggggtccattgacagcctccacaaagtgttcccattcacacaaacaaaagcatgcgacgtgttctgcgcagacctgaaaacctgcttcttcttctcgatccttctgctgctgtcgttgacagggttggctttattctacgttccagacaaacaggtattacgtgagaagtccggagaagaggaagatgaaagatcggccgcggttgtatgttttggagaaatgttaggggctttgaaggggctgaagaaGCCCATGTTACTACTGATGGCAGTTACGGCAATAAACTGGTCAGCGTGGTTCGCATACTTCTTGTACAACACTGATTGGATGGGTAAAGAGGTATACGGTGGGACGGTTGGGAATCAAGCGTACAAAGACGGTGTCCAGAAGGGAGCTTTGGGTCTTTTGATAAACTCCGTGGTTTTGGGTGTTATGTCTTTGGGTGTGGAACCCATTGGACGTGCGGTTGGTGGCGCCAAAAACCTCTGGGGAATTGTCAATTTAATCCTTGCCGCTGGTTTAGCCATGACTGTTTATATTAGCAAAGTAGCTATGCACCAGCGCCATGTTAACCCCAACTATATTGGTCATCCCTCCACAGGCGTCCAAGCCGGAGCCTTGTCTTTTTTTGCTGTTCTTGGCATTCCTCTTGCGATAACATTTAGTGTTCCGTTTGCATTAGCATCTATTTACTCAAGTGAGACTGGTGCAGGACAAGGTTTATCTCTGGGAGTTCTCAATCTTGCAATTGTGGTTCCACAAATGATAGTGGCAGCAATTAGTGGGCCATGGGATAAATTATTTGGAGGCGGTAATTTGCCGGCGTTCGTGGCAGGTGCAGTGGCAGCTGCCGTAAGTGGAATAATGGCAATTTTCATGCTGCCTTCTACAAAACAATCAGAAGCGGCTAAAGCTGCTCTCCCCATCGGTGGTTTCCATTAG 1539 0.2222 MSSSNKNTIKNGDTHNSLQLELGSPVQPSPIWKLMAVASIAAGIQFGWALQLSLLTPYSQLLGVPHQWSSFIWLCGPISGMVVQPIVGYYSDRCTSKLGRRRPFILAGAAAVAIAVFLIGFAADIGHALGDNLTKKTRPRAVGIFVIGFWILDVANNMLQGPCRAFLGDLAAGDERKTRLANAFFSFFMAVGSVLGYGAGSIDSLHKVFPFTQTKACDVFCADLKTCFFFSILLLLSLTGLALFYVPDKQVLREKSGEEEDERSAAVVCFGEMLGALKGLKKPMLLLMAVTAINWSAWFAYFLYNTDWMGKEVYGGTVGNQAYKDGVQKGALGLLINSVVLGVMSLGVEPIGRAVGGAKNLWGIVNLILAAGLAMTVYISKVAMHQRHVNPNYIGHPSTGVQAGALSFFAVLGIPLAITFSVPFALASIYSSETGAGQGLSLGVLNLAIVVPQMIVAAISGPWDKLFGGGNLPAFVAGAVAAAVSGIMAIFMLPSTKQSEAAKAALPIGGFH 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00484 512 PANTHER SUGAR TRANSPORTER 15 500 - -
Aip08g00484 512 Pfam MFS/sugar transport protein 39 302 - -
Aip08g00484 512 SUPERFAMILY MFS general substrate transporter 34 499 IPR036259 -
Aip08g00484 512 TIGRFAM GPH_sucrose: sucrose/H+ symporter 30 498 IPR005989 GO:0005887|GO:0008515|GO:0015770
Aip08g00484 512 CDD MFS_SLC45_SUC 34 491 - -
Aip08g00484 512 Gene3D MFS general substrate transporter like domains 27 502 IPR036259 -
Aip08g00484 512 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 15 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00484 Aip-Chr8 3819483 3822062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00484 14 512 Sucrose Transporter Gene Family AT1G71880 64.892 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00484 K15378 - gmx:100784153 681.789